| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046811
Identifier: 78046811
GI number: 78046811
Start: 1415836
End: 1416327
Strand: Reverse
Name: 78046811
Synonym: XCV1255
Alternate gene names: NA
Gene position: 1416327-1415836 (Counterclockwise)
Preceding gene: 78046812
Following gene: 78046808
Centisome position: 27.35
GC content: 67.48
Gene sequence:
>492_bases GTGACCACCGCCCCCACTGCCACACCCACCGCTGCCGATGTCCTGTGCGTGGCCGATATCGGCCTGGACGCACCTGCCGC CCTGCTCGCGCGCTATGGCTTGCGCCTGCATCGCGTGGACAGTGGTGCAGCGATTCCAGGCAGTTTCTGGGGCGAACCGG AGGCCGGCATCATCGGCTGCGATGTGTACGTGCGCGACGACACCCCGGTGCATTCGCTCCTGCACGAAGCCGGACATCTG ATCGTGCTGCCTGCGGAAAAACGCGCCGCCGTGCATACCGACGCCACCGATTCGGTGGAGGAAGAAGACGCCACCTGTTA CCTGCAGATCCTGCTGGCCGAGCAACTGCCCGGCGTGGGCAGCGCGCGCCTGATGGCGGACACGGACAGCTGGGGCTATA CGTATCGGCTGGGCTCCACCCGTGCCTGGTTCGAGCAGGACGCGGAGAACGCGCGCAGCTGGCTGGACGCACGCGGCCTG TTGCCTGCCTGA
Upstream 100 bases:
>100_bases CGGTCGCCCTTCCGGAAGACGGCGACAAGTAAGCGCCGACAACGGCACCGCGTTCGCACGGTGCCGTTGTTGCATGTGAC CCGACCGCGAGCCATTGCGC
Downstream 100 bases:
>100_bases GCTTGCGCGGCGCGTTCAAGTGGCTGCCCAACCGCAGCGAGCAGTGGTCAGCAGCGACGGGCATCAGGGCAGTGCGGCGT TCGCAGCAGCAGCGGCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTTAPTATPTAADVLCVADIGLDAPAALLARYGLRLHRVDSGAAIPGSFWGEPEAGIIGCDVYVRDDTPVHSLLHEAGHL IVLPAEKRAAVHTDATDSVEEEDATCYLQILLAEQLPGVGSARLMADTDSWGYTYRLGSTRAWFEQDAENARSWLDARGL LPA
Sequences:
>Translated_163_residues MTTAPTATPTAADVLCVADIGLDAPAALLARYGLRLHRVDSGAAIPGSFWGEPEAGIIGCDVYVRDDTPVHSLLHEAGHL IVLPAEKRAAVHTDATDSVEEEDATCYLQILLAEQLPGVGSARLMADTDSWGYTYRLGSTRAWFEQDAENARSWLDARGL LPA >Mature_162_residues TTAPTATPTAADVLCVADIGLDAPAALLARYGLRLHRVDSGAAIPGSFWGEPEAGIIGCDVYVRDDTPVHSLLHEAGHLI VLPAEKRAAVHTDATDSVEEEDATCYLQILLAEQLPGVGSARLMADTDSWGYTYRLGSTRAWFEQDAENARSWLDARGLL PA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17284
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPTATPTAADVLCVADIGLDAPAALLARYGLRLHRVDSGAAIPGSFWGEPEAGIIGC CCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE DVYVRDDTPVHSLLHEAGHLIVLPAEKRAAVHTDATDSVEEEDATCYLQILLAEQLPGVG EEEEECCCCHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCCEEHHEEEHHHHCCCCC SARLMADTDSWGYTYRLGSTRAWFEQDAENARSWLDARGLLPA CEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTAPTATPTAADVLCVADIGLDAPAALLARYGLRLHRVDSGAAIPGSFWGEPEAGIIGC CCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE DVYVRDDTPVHSLLHEAGHLIVLPAEKRAAVHTDATDSVEEEDATCYLQILLAEQLPGVG EEEEECCCCHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCCEEHHEEEHHHHCCCCC SARLMADTDSWGYTYRLGSTRAWFEQDAENARSWLDARGLLPA CEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA