| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046777
Identifier: 78046777
GI number: 78046777
Start: 1367593
End: 1368018
Strand: Reverse
Name: 78046777
Synonym: XCV1221
Alternate gene names: NA
Gene position: 1368018-1367593 (Counterclockwise)
Preceding gene: 78046778
Following gene: 78046772
Centisome position: 26.42
GC content: 61.03
Gene sequence:
>426_bases ATGCTGGTCTGGATCACGCACGCACTTGCATTGGCGATCCACGAACGTCAATTGAGCGAGCACGGCGGCGCAAGCGGAGT GCGCGACGAGGCACTCTTGGCCTCGGCACTGGCACGCCCGCAGCAACTGTTTTCCTACGGCGATCCTCCACCCGATCTTG TAGAGCTGACGGCCAGCCTGGCCTACGGGTTCGCGCGCAATCATCCGTTCGTAGATGGCAACAAACGGACTGCCCATGTG TGCTATCGGGTTTTTTTGCTACTCAACGGCGCCGAACTCATCGCTTCGCAGGAAGAGAAATACGTTGCCATGATGGGCCT GGCCGATGGCGCGTGGAGCGAAGCGACGTTTGCGCAATGGCTGCGACCTCGCGTGCGTTTGCGCGCGGACACGCATGTAC ACGAACCGCAGGGCCACTACGGCTGA
Upstream 100 bases:
>100_bases CCGCATTCGACCCGACGTTGGCCGCGCAGATGGATGTGGCCGAGCAGGTGATGCGCGAGGATCGCCAAGTGCTGAACAAG CTGGCCAAGTGAACACGCGC
Downstream 100 bases:
>100_bases AAACAGGCCTGTGGCACGCGACGCGCTTGTCTGGCATTGCATGCGCAGTCTTGGATCCACACGCCGCAACCAGTCAGCAC TGACGTCGCTGCATGGCACA
Product: putative prophage maintenance system killer protein
Products: NA
Alternate protein names: Death-On-Curing Protein; Death On Curing Protein; Doc Protein; Prophage Maintenance System Killer Protein; Xin-Antitoxin System Toxin Component Fic Family; Death-On-Curing Protein DOC; Death ON Curing Protein; Phage Death On Curing Protein; Fic Family xin-Antitoxin System Toxin Component; Death On Curing xin Protein Doc; Phage Maintenance Killer Protein; Addiction Module xin
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLVWITHALALAIHERQLSEHGGASGVRDEALLASALARPQQLFSYGDPPPDLVELTASLAYGFARNHPFVDGNKRTAHV CYRVFLLLNGAELIASQEEKYVAMMGLADGAWSEATFAQWLRPRVRLRADTHVHEPQGHYG
Sequences:
>Translated_141_residues MLVWITHALALAIHERQLSEHGGASGVRDEALLASALARPQQLFSYGDPPPDLVELTASLAYGFARNHPFVDGNKRTAHV CYRVFLLLNGAELIASQEEKYVAMMGLADGAWSEATFAQWLRPRVRLRADTHVHEPQGHYG >Mature_141_residues MLVWITHALALAIHERQLSEHGGASGVRDEALLASALARPQQLFSYGDPPPDLVELTASLAYGFARNHPFVDGNKRTAHV CYRVFLLLNGAELIASQEEKYVAMMGLADGAWSEATFAQWLRPRVRLRADTHVHEPQGHYG
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15617; Mature: 15617
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVWITHALALAIHERQLSEHGGASGVRDEALLASALARPQQLFSYGDPPPDLVELTASL CEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHH AYGFARNHPFVDGNKRTAHVCYRVFLLLNGAELIASQEEKYVAMMGLADGAWSEATFAQW HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHH LRPRVRLRADTHVHEPQGHYG HHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure MLVWITHALALAIHERQLSEHGGASGVRDEALLASALARPQQLFSYGDPPPDLVELTASL CEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHH AYGFARNHPFVDGNKRTAHVCYRVFLLLNGAELIASQEEKYVAMMGLADGAWSEATFAQW HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHH LRPRVRLRADTHVHEPQGHYG HHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA