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The map label for this gene is atoS [C]

Identifier: 78046635

GI number: 78046635

Start: 1210560

End: 1211828

Strand: Reverse

Name: atoS [C]

Synonym: XCV1079

Alternate gene names: 78046635

Gene position: 1211828-1210560 (Counterclockwise)

Preceding gene: 78046642

Following gene: 78046634

Centisome position: 23.4

GC content: 66.04

Gene sequence:

>1269_bases
ATGACAGACCGATATCGCCAGATCGTGGCACTGTCGCGCGATTGCATCAAAGAGATCGACCTGGATGGGCGAATCACGTC
GGTCAACCGCAACGGACTGGTCGGACTTGGGGCCAGTTCTGCGGATCAGGTTGTTGCCCGCCCCTGGCGCGAGCTGTGGC
CACCCGAGGCGGCGGCCATGGTGGATGCGGCCATGGCCGAGGCGGCCAAAGGCGCAACCCGGGAATTCGAGGCCAGCTGC
GTGAACCTGGCCGGCGTACGCCAGACCTGGCAGGTCGTTACCAGCCCATTGTTCGACGAGCTGGGCAAGGTCGAGGCCAT
CCTGGCGGTGAGCAGGAATGTCTCCGACCGCCGCGCGCTGGAGGCAGCCTTTCACACCCTGGACAGCACCCTGTCGGCAG
AACGCGCGTTTTCCACCAGTGCCCTGGTGCTGGCGCGCGCGCGCGAAACCTCGCTGTCGACCGAGCTGCACAGCCTGCGC
GACTTGCACGAGCGCATCGAAGGCGACCTGGACATCGCGCGCGCCGCGCAGAACGCCGCCGAGAAGATCTCCGAGCAGGC
GCAGAAAGGCGAAGCGGTAGGACAACTGCTGGCCGGCGTGGTCCACGACTTGAACAACGTGCTGCAGGCTGCCACATCGG
CGATCGACCTGGTCGTGCAGCGCGCGCAGATCGACGCGCACGACGCCAAGTTGCTAAGCGTGGCCGACGCGGCGCTTCAA
CATGGCTCGGTGATGGCGCAGCGCCTGGTCGGCTTCTCGCGTCAGTACCCCTACAGCCCCGAAGCGGTGGACCTGGCCGA
ACTGGCAGAACAGCTCAGCCCGTTACTGGAACAGGTGGTCGGCGCAGACCTGCGGTTGCAGCTGCGCACCGCAGAGGGCG
GATGCTGCGCGATGGTCGACCGCCACACCGTGGAGCGCGCCATCTTGAACCTGGTGATCAATGCGCGCGATGCCTGCACC
AGCGGCGACTGCATCAGTGTGGAAACTGGCGAAACCTTCGTCACCGAGGAGCAGGCGCGACTGGCCAAACCGGCCGGGCA
CTACATGACCATCGCGGTTGCCGATACCGGGCACGGCATGGACAGCGTGGTGCAGGCGCGGTTATTCGAGGCGTACTTCA
CCACCAAGCACGCCAATAAGGGCGCTGGCCTGGGATTGGCGCAGGTCTACAGCGCCGTGCGCCAGGCCGGCGGTTTTATA
GACGTCTTCTCGGCGCCGGGCCAGGGTGCGCGCTTCGTGCTGGCATTTCCGCGCGTGCAGCGAAGCTAG

Upstream 100 bases:

>100_bases
CCCGCCTGAATCCAGACAAAGCCCGTGTTCGCTACCGGCACATTGCAGCAACCGGATTTGTGAAAATTCCGTTAATTCCA
TTCCGGGGGCAGCAATTGCA

Downstream 100 bases:

>100_bases
AGGCCTGTTGCAGGTGTTGCACGGACGCGCTGGTGAGTGACATGGCTGCTTCCTGCAACTGCTTGCAGATCGCGCAGAGC
AGTTCGCGCACGCGCTCAGC

Product: histidine kinase/response regulator hybrid protein

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTDRYRQIVALSRDCIKEIDLDGRITSVNRNGLVGLGASSADQVVARPWRELWPPEAAAMVDAAMAEAAKGATREFEASC
VNLAGVRQTWQVVTSPLFDELGKVEAILAVSRNVSDRRALEAAFHTLDSTLSAERAFSTSALVLARARETSLSTELHSLR
DLHERIEGDLDIARAAQNAAEKISEQAQKGEAVGQLLAGVVHDLNNVLQAATSAIDLVVQRAQIDAHDAKLLSVADAALQ
HGSVMAQRLVGFSRQYPYSPEAVDLAELAEQLSPLLEQVVGADLRLQLRTAEGGCCAMVDRHTVERAILNLVINARDACT
SGDCISVETGETFVTEEQARLAKPAGHYMTIAVADTGHGMDSVVQARLFEAYFTTKHANKGAGLGLAQVYSAVRQAGGFI
DVFSAPGQGARFVLAFPRVQRS

Sequences:

>Translated_422_residues
MTDRYRQIVALSRDCIKEIDLDGRITSVNRNGLVGLGASSADQVVARPWRELWPPEAAAMVDAAMAEAAKGATREFEASC
VNLAGVRQTWQVVTSPLFDELGKVEAILAVSRNVSDRRALEAAFHTLDSTLSAERAFSTSALVLARARETSLSTELHSLR
DLHERIEGDLDIARAAQNAAEKISEQAQKGEAVGQLLAGVVHDLNNVLQAATSAIDLVVQRAQIDAHDAKLLSVADAALQ
HGSVMAQRLVGFSRQYPYSPEAVDLAELAEQLSPLLEQVVGADLRLQLRTAEGGCCAMVDRHTVERAILNLVINARDACT
SGDCISVETGETFVTEEQARLAKPAGHYMTIAVADTGHGMDSVVQARLFEAYFTTKHANKGAGLGLAQVYSAVRQAGGFI
DVFSAPGQGARFVLAFPRVQRS
>Mature_421_residues
TDRYRQIVALSRDCIKEIDLDGRITSVNRNGLVGLGASSADQVVARPWRELWPPEAAAMVDAAMAEAAKGATREFEASCV
NLAGVRQTWQVVTSPLFDELGKVEAILAVSRNVSDRRALEAAFHTLDSTLSAERAFSTSALVLARARETSLSTELHSLRD
LHERIEGDLDIARAAQNAAEKISEQAQKGEAVGQLLAGVVHDLNNVLQAATSAIDLVVQRAQIDAHDAKLLSVADAALQH
GSVMAQRLVGFSRQYPYSPEAVDLAELAEQLSPLLEQVVGADLRLQLRTAEGGCCAMVDRHTVERAILNLVINARDACTS
GDCISVETGETFVTEEQARLAKPAGHYMTIAVADTGHGMDSVVQARLFEAYFTTKHANKGAGLGLAQVYSAVRQAGGFID
VFSAPGQGARFVLAFPRVQRS

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=277, Percent_Identity=28.158844765343, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=28.5106382978723, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 45285; Mature: 45153

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRYRQIVALSRDCIKEIDLDGRITSVNRNGLVGLGASSADQVVARPWRELWPPEAAAM
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHHHHH
VDAAMAEAAKGATREFEASCVNLAGVRQTWQVVTSPLFDELGKVEAILAVSRNVSDRRAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAAFHTLDSTLSAERAFSTSALVLARARETSLSTELHSLRDLHERIEGDLDIARAAQNAA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EKISEQAQKGEAVGQLLAGVVHDLNNVLQAATSAIDLVVQRAQIDAHDAKLLSVADAALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HGSVMAQRLVGFSRQYPYSPEAVDLAELAEQLSPLLEQVVGADLRLQLRTAEGGCCAMVD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHH
RHTVERAILNLVINARDACTSGDCISVETGETFVTEEQARLAKPAGHYMTIAVADTGHGM
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCCCCH
DSVVQARLFEAYFTTKHANKGAGLGLAQVYSAVRQAGGFIDVFSAPGQGARFVLAFPRVQ
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCC
RS
CC
>Mature Secondary Structure 
TDRYRQIVALSRDCIKEIDLDGRITSVNRNGLVGLGASSADQVVARPWRELWPPEAAAM
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHHHHH
VDAAMAEAAKGATREFEASCVNLAGVRQTWQVVTSPLFDELGKVEAILAVSRNVSDRRAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAAFHTLDSTLSAERAFSTSALVLARARETSLSTELHSLRDLHERIEGDLDIARAAQNAA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EKISEQAQKGEAVGQLLAGVVHDLNNVLQAATSAIDLVVQRAQIDAHDAKLLSVADAALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HGSVMAQRLVGFSRQYPYSPEAVDLAELAEQLSPLLEQVVGADLRLQLRTAEGGCCAMVD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHH
RHTVERAILNLVINARDACTSGDCISVETGETFVTEEQARLAKPAGHYMTIAVADTGHGM
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCCCCH
DSVVQARLFEAYFTTKHANKGAGLGLAQVYSAVRQAGGFIDVFSAPGQGARFVLAFPRVQ
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA