| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is pgpB [C]
Identifier: 78046623
GI number: 78046623
Start: 1196846
End: 1197388
Strand: Reverse
Name: pgpB [C]
Synonym: XCV1067
Alternate gene names: 78046623
Gene position: 1197388-1196846 (Counterclockwise)
Preceding gene: 78046624
Following gene: 78046622
Centisome position: 23.12
GC content: 66.11
Gene sequence:
>543_bases ATGTCGTCAACGCGGCTTGAGGTCTTGCGCGGTCACGAAGCGCGCTGGTGCCGACGCGCCAATCTGTGGTGCCGACGCCA CCCGGTACGGCGCGTCTTCGCCACTATCAGCCGCCTGGGCGACGGCGTGTTCTGGTACGCCTTGATGGGGTTGCTGGTGG TGCTCGACGGCATGGACGGTGTACGTGCATCGGCGCACATGGCTGCCACCGGCGTGCTTGCATTGACGCTATACAAGGCG CTCAAACGCTGGACCCGGCGTCCGCGGCCATATGCGGCGGACGTGCGTATTCGCGCGTGGGTGGCACCGCTGGACGAGTT CAGCTTTCCCTCCGGCCATACCTTGCACGCGGTGTCCTTCAGCATCGTGGCGCTGGCCTATTACCCCTGGCTGGCTCCCT TGCTGGTGCCGTTTTCGGCCGGCGTGGCGCTCTCGCGGGTGGTGTTGGGGCTGCATTATCCCAGCGACGTGCTGGCCGCC ACGCTGATCGGCGTGCTGCTGGCCAGCCTGTCGCTGTGGGGCTTGCCGGTGGTGTTGAGATAA
Upstream 100 bases:
>100_bases GGCACGGCGGCGGCGCAGGCGATGAAGAAATTGCATCCGGACAATGTGGTCTGCGACTTCGAAGCCTTGTTGCTGGGAAT CAGCGCTGCACGGCGGCGTT
Downstream 100 bases:
>100_bases GCGCTAGGGGTTGCGTGATGGCGGCTCGCTGACAGGTAAGCGTAACGGCAAACGGACAGGTACCAAGACGCTGCCCAGTC AGCAACAAGGCCTCTTCGCC
Product: hypothetical protein
Products: Phospatidylglycerol; Phosphate [C]
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Membrane-Associated Phospholipid Phosphatase; PA-Phosphatase-Like Phosphoesterase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; Type II Phosphatidic Acid Phosphatase; Phosphatidylglycerophosphatase B; Phosphoesterase Family Protein; PAP2 Superfamily Protein; Phosphoesterase Phosphatidic Acid Phosphatase-Related; Transmembrane PAP Family Protein; Phosphoesterase Pa-Phosphatase
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSSTRLEVLRGHEARWCRRANLWCRRHPVRRVFATISRLGDGVFWYALMGLLVVLDGMDGVRASAHMAATGVLALTLYKA LKRWTRRPRPYAADVRIRAWVAPLDEFSFPSGHTLHAVSFSIVALAYYPWLAPLLVPFSAGVALSRVVLGLHYPSDVLAA TLIGVLLASLSLWGLPVVLR
Sequences:
>Translated_180_residues MSSTRLEVLRGHEARWCRRANLWCRRHPVRRVFATISRLGDGVFWYALMGLLVVLDGMDGVRASAHMAATGVLALTLYKA LKRWTRRPRPYAADVRIRAWVAPLDEFSFPSGHTLHAVSFSIVALAYYPWLAPLLVPFSAGVALSRVVLGLHYPSDVLAA TLIGVLLASLSLWGLPVVLR >Mature_179_residues SSTRLEVLRGHEARWCRRANLWCRRHPVRRVFATISRLGDGVFWYALMGLLVVLDGMDGVRASAHMAATGVLALTLYKAL KRWTRRPRPYAADVRIRAWVAPLDEFSFPSGHTLHAVSFSIVALAYYPWLAPLLVPFSAGVALSRVVLGLHYPSDVLAAT LIGVLLASLSLWGLPVVLR
Specific function: Hydrolyzes Phosphatidylglycerophosphate, Phosphatidic Acid, And Lysophosphatidic Acid; The Pattern Of Activities Varies According To Subcellular Location. [C]
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein. Inner And Outer Membranes [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.27 [C]
Molecular weight: Translated: 20001; Mature: 19870
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTRLEVLRGHEARWCRRANLWCRRHPVRRVFATISRLGDGVFWYALMGLLVVLDGMDG CCCCHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC VRASAHMAATGVLALTLYKALKRWTRRPRPYAADVRIRAWVAPLDEFSFPSGHTLHAVSF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEECCHHHCCCCCCCCHHHHHH SIVALAYYPWLAPLLVPFSAGVALSRVVLGLHYPSDVLAATLIGVLLASLSLWGLPVVLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure SSTRLEVLRGHEARWCRRANLWCRRHPVRRVFATISRLGDGVFWYALMGLLVVLDGMDG CCCHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC VRASAHMAATGVLALTLYKALKRWTRRPRPYAADVRIRAWVAPLDEFSFPSGHTLHAVSF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEECCHHHCCCCCCCCHHHHHH SIVALAYYPWLAPLLVPFSAGVALSRVVLGLHYPSDVLAATLIGVLLASLSLWGLPVVLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; Phosphatidylglycerophosphate [C]
Specific reaction: H2O + (0.02) Phosphatidylglycerophosphate --> (0.02) Phospatidylglycerol + Phosphate [C]
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA