Click here to switch to the map view.

The map label for this gene is talB [H]

Identifier: 78046495

GI number: 78046495

Start: 1066798

End: 1067766

Strand: Reverse

Name: talB [H]

Synonym: XCV0939

Alternate gene names: 78046495

Gene position: 1067766-1066798 (Counterclockwise)

Preceding gene: 78046496

Following gene: 78046494

Centisome position: 20.62

GC content: 65.43

Gene sequence:

>969_bases
ATGACTGCATCCCCCTCCAAGCTCGCCCAGCTGCGTGAACTGTCCGTTGTCGTTGCCGATACCGGCGACTACGACGCCAT
CAAGCGCCTGAAGCCTGTCGACTGCACCACCAATCCCACCCTGGTCAAAAAGGCGCTGGATCTGCCGGTCTATGCCGACC
TGATCGAACGCGAACTGGCCTGGGGCCGCGAACATGGCGGCGACGATCGCACCGCCACCGTCAACGAAGTCGCCGACCGG
CTCACCATCGGCGTCGGCGTCAAGCTGGCCGAACTGGTGCCGGGGCGCGTGTCCACCGAGGTCGACGCCGATCTGGCACA
CGACACCCAGGCCACCATCGCCAAGGCGCGCAAGTTCGTTGCGATGTACGCCGAGCGCGGCGTGTCCAAGGACAAGATCC
TGATCAAGATCGCCGCCACCTGGGAAGGCATCGAGGCCGCCCGTCAGCTGCAGAAAGAAGGCATCGACTGCAACCTGACG
CTGATCTTCAACCGCTCGCAGGCACTGGCCTGTGCGGAAGCCGGCGTGTTCCTGATCTCGCCGTTCGTCGGCCGCATCCT
GGACTACTACGTCGCCCAGGGGCAGACCCCGGCCAGCATCGACGAAGACCCGGGCGTGGTCTTCGTGCGCACCGTCTACA
ACGAGTTCAAGCAGCGCGGCTCGTCCACCGTGGTCATGGGCGCCTCGTTCCGCTCCACCGCGCAGATCGAAGCGTTGGCA
GGGTGCGACCGCCTGACTATTTCGCCGGACCTGCTGGAAAAGCTCGACGCCGAGCACGGCGAATTGCCGCGCAAGCTCTC
GCCGGCCAAGGCCGACAATGCCCAGTTCACCCCGATCGACAGCGACAGCTTCGCTTCGGGCCTGGCCGCCGACCCGATGG
CCACCGAGAAGCTGGCCGGCGGTATCGACACGTTCGCCAAGGACTTGCACGCACTGCGCAAGACCATCGCCGACAAGCTC
GCTGGCTGA

Upstream 100 bases:

>100_bases
GCACGACCAACCCGCAGCAGCGGGCGACTTCCGGCGCGCGGCGCGCTAACGTAGCGCGCTGCGCCATCCCCGACCCGTTC
CACGATTCGAGAGAACCCGC

Downstream 100 bases:

>100_bases
TCACACAGCGAGCCTGTTCTGCATACAACGCCTGCAGCTGCCTGGCTGCGGGCGTTGTCGTTTTTGAGTCTGGTTTAGAG
ATGTGCGGCCGAGCCGGTCT

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTASPSKLAQLRELSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELAWGREHGGDDRTATVNEVADR
LTIGVGVKLAELVPGRVSTEVDADLAHDTQATIAKARKFVAMYAERGVSKDKILIKIAATWEGIEAARQLQKEGIDCNLT
LIFNRSQALACAEAGVFLISPFVGRILDYYVAQGQTPASIDEDPGVVFVRTVYNEFKQRGSSTVVMGASFRSTAQIEALA
GCDRLTISPDLLEKLDAEHGELPRKLSPAKADNAQFTPIDSDSFASGLAADPMATEKLAGGIDTFAKDLHALRKTIADKL
AG

Sequences:

>Translated_322_residues
MTASPSKLAQLRELSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELAWGREHGGDDRTATVNEVADR
LTIGVGVKLAELVPGRVSTEVDADLAHDTQATIAKARKFVAMYAERGVSKDKILIKIAATWEGIEAARQLQKEGIDCNLT
LIFNRSQALACAEAGVFLISPFVGRILDYYVAQGQTPASIDEDPGVVFVRTVYNEFKQRGSSTVVMGASFRSTAQIEALA
GCDRLTISPDLLEKLDAEHGELPRKLSPAKADNAQFTPIDSDSFASGLAADPMATEKLAGGIDTFAKDLHALRKTIADKL
AG
>Mature_321_residues
TASPSKLAQLRELSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELAWGREHGGDDRTATVNEVADRL
TIGVGVKLAELVPGRVSTEVDADLAHDTQATIAKARKFVAMYAERGVSKDKILIKIAATWEGIEAARQLQKEGIDCNLTL
IFNRSQALACAEAGVFLISPFVGRILDYYVAQGQTPASIDEDPGVVFVRTVYNEFKQRGSSTVVMGASFRSTAQIEALAG
CDRLTISPDLLEKLDAEHGELPRKLSPAKADNAQFTPIDSDSFASGLAADPMATEKLAGGIDTFAKDLHALRKTIADKLA
G

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=331, Percent_Identity=46.2235649546828, Blast_Score=287, Evalue=1e-77,
Organism=Escherichia coli, GI1786189, Length=318, Percent_Identity=50.6289308176101, Blast_Score=311, Evalue=3e-86,
Organism=Escherichia coli, GI1788807, Length=316, Percent_Identity=48.1012658227848, Blast_Score=295, Evalue=3e-81,
Organism=Caenorhabditis elegans, GI25153750, Length=319, Percent_Identity=49.2163009404389, Blast_Score=288, Evalue=3e-78,
Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=49.0909090909091, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=48.4536082474227, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323386, Length=311, Percent_Identity=49.5176848874598, Blast_Score=270, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6321480, Length=321, Percent_Identity=43.9252336448598, Blast_Score=267, Evalue=2e-72,
Organism=Drosophila melanogaster, GI45549185, Length=319, Percent_Identity=46.3949843260188, Blast_Score=273, Evalue=1e-73,

Paralogues:

None

Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 34616; Mature: 34485

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPSKLAQLRELSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELA
CCCCHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
WGREHGGDDRTATVNEVADRLTIGVGVKLAELVPGRVSTEVDADLAHDTQATIAKARKFV
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHH
AMYAERGVSKDKILIKIAATWEGIEAARQLQKEGIDCNLTLIFNRSQALACAEAGVFLIS
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHH
PFVGRILDYYVAQGQTPASIDEDPGVVFVRTVYNEFKQRGSSTVVMGASFRSTAQIEALA
HHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
GCDRLTISPDLLEKLDAEHGELPRKLSPAKADNAQFTPIDSDSFASGLAADPMATEKLAG
CCCCEEECHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHHHC
GIDTFAKDLHALRKTIADKLAG
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASPSKLAQLRELSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELA
CCCHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
WGREHGGDDRTATVNEVADRLTIGVGVKLAELVPGRVSTEVDADLAHDTQATIAKARKFV
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHH
AMYAERGVSKDKILIKIAATWEGIEAARQLQKEGIDCNLTLIFNRSQALACAEAGVFLIS
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHH
PFVGRILDYYVAQGQTPASIDEDPGVVFVRTVYNEFKQRGSSTVVMGASFRSTAQIEALA
HHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
GCDRLTISPDLLEKLDAEHGELPRKLSPAKADNAQFTPIDSDSFASGLAADPMATEKLAG
CCCCEEECHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCHHHHHHC
GIDTFAKDLHALRKTIADKLAG
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]