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The map label for this gene is nrtB [H]

Identifier: 78046436

GI number: 78046436

Start: 1010079

End: 1010963

Strand: Reverse

Name: nrtB [H]

Synonym: XCV0880

Alternate gene names: 78046436

Gene position: 1010963-1010079 (Counterclockwise)

Preceding gene: 78046437

Following gene: 78046435

Centisome position: 19.52

GC content: 69.83

Gene sequence:

>885_bases
ATGAGCCGCAGTACCGCAAGCGCAGTGCCGCCGATTCCACCGGTGCGGCCCGAGTACGAAGTGGCACTGACCCCGCTGGA
CCCTGCCCTGGGCGCCGCGACCACGCCCACGCGTTGGCACGCACCGCCCTGGCTGCGCAAGGCATTGGTGCTGGTGGTCT
TGGTCGCGGCATGGGAAATCGCCGCGCGGCTGGTCGGCGACGATCTGATGCTGCCCGGCGCAGTGCAGACCGCGCGCGCG
TTCTACGACGGGCTGCTGTCGGGCGAACTGCTGCGCCGGGTCGGTGCGTCGTTGCGCGTGCTGGCGCAAGGTTATGCGCT
GGGCGTGCTGCTGGCGTTCGTGCTGACCGCGCTGGCCGCTTCCACGCGCTGTGGCCGCGATGTGCTCGGCACGCTGACCG
CCATGTTCAACCCGCTGCCGGCCATTGCGCTGTTGCCGCTGGCCTTGCTGTGGTTCGGGCTGGGCACCGGCAGCCTGGTG
TTCGTGCTGGTGCACTCGGTCCTGTGGCCGCTGGCGCTGACCACCTACGCCGGCTTCCAGGCGGTACCGGACACGCTGCG
CATGGCCGGGCGCAACTACGGCCTGCGCGGCCCGCGCTATGTGGTGCAACTGCTGGTTCCGGCGGCGCTGCCGGCGATCC
TGTCCGGGCTGAAGATCGGCTGGGCATTCGCCTGGCGCACCCTGATCGCCGCCGAACTGGTGTTCGGCGCCACCTCCGGC
CAGGGCGGCCTGGGCTGGTACATCTTCCAGAACCGCAATGAGCTTTACACCGACAAGGTCTTCGCGGGGCTGGCAATGGT
GATCGTGCTGGGGCTGCTGGTGGAGGGCGTGGTGTTCCAGGCGATCGAGCGGCTCACGGTGCGTCGCTGGGGCATGCAGC
GCTAG

Upstream 100 bases:

>100_bases
GCATTCACCGGCTGCTGTTCGATCTGCCCGATGACACGCTGGACGACGACAAGGTGGCACCGCTGCGTCGCCCGTCCCTG
CGCCAACGCGAGGCGCTGAC

Downstream 100 bases:

>100_bases
CGCGGCCCCGGCGGCACGGTCGCGTGCGCTTAACGAAGTTGGCTTATGCTTCGGCCCCCATTCTCTGCCGCTCGCCGCCA
TGCCCACTGCCCCCTTCACC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSRSTASAVPPIPPVRPEYEVALTPLDPALGAATTPTRWHAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAVQTARA
FYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRCGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLV
FVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVRRWGMQR

Sequences:

>Translated_294_residues
MSRSTASAVPPIPPVRPEYEVALTPLDPALGAATTPTRWHAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAVQTARA
FYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRCGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLV
FVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVRRWGMQR
>Mature_293_residues
SRSTASAVPPIPPVRPEYEVALTPLDPALGAATTPTRWHAPPWLRKALVLVVLVAAWEIAARLVGDDLMLPGAVQTARAF
YDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRCGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVF
VLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATSGQ
GGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVRRWGMQR

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=30.8016877637131, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786564, Length=216, Percent_Identity=28.7037037037037, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31579; Mature: 31448

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSTASAVPPIPPVRPEYEVALTPLDPALGAATTPTRWHAPPWLRKALVLVVLVAAWEI
CCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARLVGDDLMLPGAVQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STRCGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVFVLVHSVLWPLALTTYAGFQ
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVPDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
HCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVRRWGMQR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRSTASAVPPIPPVRPEYEVALTPLDPALGAATTPTRWHAPPWLRKALVLVVLVAAWEI
CCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AARLVGDDLMLPGAVQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STRCGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVFVLVHSVLWPLALTTYAGFQ
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVPDTLRMAGRNYGLRGPRYVVQLLVPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
HCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAIERLTVRRWGMQR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]