| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046369
Identifier: 78046369
GI number: 78046369
Start: 928155
End: 928826
Strand: Reverse
Name: 78046369
Synonym: XCV0813
Alternate gene names: NA
Gene position: 928826-928155 (Counterclockwise)
Preceding gene: 78046370
Following gene: 78046355
Centisome position: 17.94
GC content: 60.12
Gene sequence:
>672_bases ATGCAGACCCACACCATGAGTCAGTTGCTTCAGAAAGCACTCGATCCATACCGCAACCAGGCGATGGAACGGCTGCTCAT CGCACGCGATGCGTTTCACTACAGCGCCGCTGGCTATGCGCTGCTGACCTCGCCGGAAACCGGTCCGGAAATAGCGCGGC ATCGCATCCATATCACCGAGTCGGGCTTCACCATTACCCAGGACGATGCCTCACCAGGGCCGGCAGGCAATGGTTACCGT ATCCGCTTCAACGCTGCCGTGCAGGCCGGCCTGGCGCGGTCGACGATGGACGCGGCCTATGCGCGCATGCTCTCGGAGAG CGTGGCCGCCACCGGGGATTACGCTACGGCAAAGAACGAGTTTACCCAGTTGCGCGACCAGGACTGGTTCGCCTTCGCGA TGCACCTGCGCAACGCCTTCAGCCACAACAACATCTGGAACTTCGGCAAGAGAAGCAAGCTTCCCGTCCGATGGCGCAGC TTTACCATCGACGCTGCAATGGCTGGACTTCCCCTCAATGACTTCCTTCCCTGGTACCACGGACTGCAACTGTGTGCGCA GATGATCCTGTACGTCGAAGGCATCGTCGATTACCGGCAGCAACGCGTCCCCTGTTACACGCAGTCATCCACCTCCGGCG CACCAGATACGCTCAACGCATCACTCCGATAA
Upstream 100 bases:
>100_bases ACGCTGGCGGCCATGCGCGCGATCAAGGCGGCGCTGGACCCGGATGGCATCTTGAATCCGGGGAAGGTGTTGCCCCACTC GCCTGCCGGGCGATAGTCCG
Downstream 100 bases:
>100_bases ACCGCAGCCCCACGCCCGGCTCGGTGACGATGTAGTGCGGGTCGGCGGCGGCGTCCTGCAGTTTCTGGCGCAGTTTGCCG ACCAGGATGCGCAGGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MQTHTMSQLLQKALDPYRNQAMERLLIARDAFHYSAAGYALLTSPETGPEIARHRIHITESGFTITQDDASPGPAGNGYR IRFNAAVQAGLARSTMDAAYARMLSESVAATGDYATAKNEFTQLRDQDWFAFAMHLRNAFSHNNIWNFGKRSKLPVRWRS FTIDAAMAGLPLNDFLPWYHGLQLCAQMILYVEGIVDYRQQRVPCYTQSSTSGAPDTLNASLR
Sequences:
>Translated_223_residues MQTHTMSQLLQKALDPYRNQAMERLLIARDAFHYSAAGYALLTSPETGPEIARHRIHITESGFTITQDDASPGPAGNGYR IRFNAAVQAGLARSTMDAAYARMLSESVAATGDYATAKNEFTQLRDQDWFAFAMHLRNAFSHNNIWNFGKRSKLPVRWRS FTIDAAMAGLPLNDFLPWYHGLQLCAQMILYVEGIVDYRQQRVPCYTQSSTSGAPDTLNASLR >Mature_223_residues MQTHTMSQLLQKALDPYRNQAMERLLIARDAFHYSAAGYALLTSPETGPEIARHRIHITESGFTITQDDASPGPAGNGYR IRFNAAVQAGLARSTMDAAYARMLSESVAATGDYATAKNEFTQLRDQDWFAFAMHLRNAFSHNNIWNFGKRSKLPVRWRS FTIDAAMAGLPLNDFLPWYHGLQLCAQMILYVEGIVDYRQQRVPCYTQSSTSGAPDTLNASLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24999; Mature: 24999
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHTMSQLLQKALDPYRNQAMERLLIARDAFHYSAAGYALLTSPETGPEIARHRIHITE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHEEEEEC SGFTITQDDASPGPAGNGYRIRFNAAVQAGLARSTMDAAYARMLSESVAATGDYATAKNE CCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FTQLRDQDWFAFAMHLRNAFSHNNIWNFGKRSKLPVRWRSFTIDAAMAGLPLNDFLPWYH HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEEHHHHHHCCCHHHHHHHHH GLQLCAQMILYVEGIVDYRQQRVPCYTQSSTSGAPDTLNASLR HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQTHTMSQLLQKALDPYRNQAMERLLIARDAFHYSAAGYALLTSPETGPEIARHRIHITE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHEEEEEC SGFTITQDDASPGPAGNGYRIRFNAAVQAGLARSTMDAAYARMLSESVAATGDYATAKNE CCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FTQLRDQDWFAFAMHLRNAFSHNNIWNFGKRSKLPVRWRSFTIDAAMAGLPLNDFLPWYH HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEEHHHHHHCCCHHHHHHHHH GLQLCAQMILYVEGIVDYRQQRVPCYTQSSTSGAPDTLNASLR HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA