Click here to switch to the map view.

The map label for this gene is 78046221

Identifier: 78046221

GI number: 78046221

Start: 748426

End: 749553

Strand: Reverse

Name: 78046221

Synonym: XCV0665

Alternate gene names: NA

Gene position: 749553-748426 (Counterclockwise)

Preceding gene: 78046222

Following gene: 78046219

Centisome position: 14.47

GC content: 66.31

Gene sequence:

>1128_bases
ATGTCGAACACCTCGCCTGTAGCGAGTGCGCCATGGCAGCCCTGCCCGCTCGGCACGCAACCACGACACGTGCGGTCGTT
GTCGGCATGCGGTGTTGGTGTCTCACGCTGCGCGCTCCGCGGGGCGGCATCCACGCCACGTTACCGGCGCTGCCGGTATG
CTTGCGGCTTTCGCGTTCGCGCTTGCCTGGCTTATTCGATGAAAGACATGCCCGTGGCTGACGAATCCTCTCGCCAACAC
GTCCTGGATGGCTATCGCATCGTCGACAGCCTGCCGGAGGACACCTATCAAGACGTCGTGCAGGTTGCCGCGTCCCTGTG
CGACACACCGATCGCGCTGATGTCGCTGGTGGACCGCGACCGCCAATGGTTCAAGGCGCGGCTGGGGCTGGGCCTGCAGC
AGACCGAACGTAGCCAGGCAGTGTGCGACCACGCCATCCGCAGCCCCGATCAGTTGATGGAAGTACCCGACTTGCGCAAG
GACAGCCGGTTTGCCGATATCTCGGTGGTCACCGGCGACACCGGCGCGCGGTTCTATGCCGGCATGCCGCTGGTCACCGA
AGAAGGCGTTGCACTGGGCACGGTCTGCGTGCTCGACACCGAGCCACGCACGCTCACCGAGTTGCAGCGCACCGGCCTGC
AGGCGCTTGCACGGGTGGCCATGCGCCTGCTCGACGAGCGCAAGCGCGAGCTGCAACTCGAGCGCGATGCCATCCTGCAG
CCGGTCGTCCCGGTCGCCAGCCAGGCCGTTGCCGACACGGGTTATCACCTGGTGATTCTGGAAGTGCAGGAATTGGCCGC
ACTGGCCGAGCGCCAGAGCGAACGTCTGCTCGGGCGCAACCTGCAGCAGCTCGACCAGGCCTTCGCGGCATTGGTGCAGG
GGCCAGGCAACAGCATCGACCGCGTCACCGACAGTGCGGAATTCATCGCCGTGCTGCGCGGCCCCGACGCCGAGCGCACC
TTGCAGCGCCTGCGCGAGATCGCCCAGCAACAACATGCGCTGGGCCTGACCGTCTTGTTGGGCCAAGCGCAATCCACTGC
CCCGGACGAGCCGATCGGCCAGGTGTTTCTACGTGCCGAGGTCGCGCTGAGCGCAGAAAAGGACCGTTACCGGCAGCGTC
TGGCCTGA

Upstream 100 bases:

>100_bases
CATTGGCTCGCCACTGCCGGGTGGGCCCGTCTGCCGCTGTGCAATCTTGCTGCAGACGGCCCGGGCGAAACCTCGCCAGA
GCGGGCGGTACACCCAGCAC

Downstream 100 bases:

>100_bases
GGCCTGCGAACCGGTCTGCTGCGTCGCAGACGTACCCTCACCCCAGCGCGCACTGCTTCAACTGGCGATCGGCGTACCAC
AGCGCGCGGCGGGCCAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase With GAF Sensor; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase; GAF Sensor Protein; Two-Component Hybrid Sensor And Regulator; Two-Component System Sensor Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Sensor Protein; GAF Domain-Containing Protein; GGDEF Domain-Containing Protein; PAS Sensor Protein; Histidine Kinase Response Regulator Hybrid Protein; Diguanylate Cyclase With PAS/PAC Sensor; Histidine Kinase-Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; Sensory Box/GGDEF Family Protein; Sensor Histidine Kinase; GGDEF Domain Protein; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Signal Transduction Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Histidine Kinase/Response Regulator Hybrid Protein; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; Phytochrome Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; PAS/PAC Sensor Protein; GGDEF Family Protein; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; GGDEF GAF Signalling Protein; Sensory Histidine Protein Kinase; Response Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Protein Containing GAF Domain; GAF Domain Protein; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GGDEF Domain-Containing PAS Signal Transduction Protein; GAF/PAS-Family Sensor Histidine Kinase; Two-Component System Sensor Kinase; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Diguanylate-Cyclase; Signaling Protein; Gaf Sensor Signal Transduction Histidine Kinase; GGDEF And GAF Signalling Protein; Phosphodiesterase; Magnesium Or Manganese-Dependent Protein Phosphatase; EAL Domain-Containing Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Sensor Kinase Protein

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSNTSPVASAPWQPCPLGTQPRHVRSLSACGVGVSRCALRGAASTPRYRRCRYACGFRVRACLAYSMKDMPVADESSRQH
VLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRDRQWFKARLGLGLQQTERSQAVCDHAIRSPDQLMEVPDLRK
DSRFADISVVTGDTGARFYAGMPLVTEEGVALGTVCVLDTEPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQ
PVVPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNLQQLDQAFAALVQGPGNSIDRVTDSAEFIAVLRGPDAERT
LQRLREIAQQQHALGLTVLLGQAQSTAPDEPIGQVFLRAEVALSAEKDRYRQRLA

Sequences:

>Translated_375_residues
MSNTSPVASAPWQPCPLGTQPRHVRSLSACGVGVSRCALRGAASTPRYRRCRYACGFRVRACLAYSMKDMPVADESSRQH
VLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRDRQWFKARLGLGLQQTERSQAVCDHAIRSPDQLMEVPDLRK
DSRFADISVVTGDTGARFYAGMPLVTEEGVALGTVCVLDTEPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQ
PVVPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNLQQLDQAFAALVQGPGNSIDRVTDSAEFIAVLRGPDAERT
LQRLREIAQQQHALGLTVLLGQAQSTAPDEPIGQVFLRAEVALSAEKDRYRQRLA
>Mature_374_residues
SNTSPVASAPWQPCPLGTQPRHVRSLSACGVGVSRCALRGAASTPRYRRCRYACGFRVRACLAYSMKDMPVADESSRQHV
LDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRDRQWFKARLGLGLQQTERSQAVCDHAIRSPDQLMEVPDLRKD
SRFADISVVTGDTGARFYAGMPLVTEEGVALGTVCVLDTEPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQP
VVPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNLQQLDQAFAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTL
QRLREIAQQQHALGLTVLLGQAQSTAPDEPIGQVFLRAEVALSAEKDRYRQRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41285; Mature: 41153

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTSPVASAPWQPCPLGTQPRHVRSLSACGVGVSRCALRGAASTPRYRRCRYACGFRVR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
ACLAYSMKDMPVADESSRQHVLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRD
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
RQWFKARLGLGLQQTERSQAVCDHAIRSPDQLMEVPDLRKDSRFADISVVTGDTGARFYA
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEC
GMPLVTEEGVALGTVCVLDTEPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQ
CCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNLQQLDQAFAALVQGPGNSID
CHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
RVTDSAEFIAVLRGPDAERTLQRLREIAQQQHALGLTVLLGQAQSTAPDEPIGQVFLRAE
HHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHH
VALSAEKDRYRQRLA
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNTSPVASAPWQPCPLGTQPRHVRSLSACGVGVSRCALRGAASTPRYRRCRYACGFRVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
ACLAYSMKDMPVADESSRQHVLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRD
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
RQWFKARLGLGLQQTERSQAVCDHAIRSPDQLMEVPDLRKDSRFADISVVTGDTGARFYA
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEC
GMPLVTEEGVALGTVCVLDTEPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQ
CCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNLQQLDQAFAALVQGPGNSID
CHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
RVTDSAEFIAVLRGPDAERTLQRLREIAQQQHALGLTVLLGQAQSTAPDEPIGQVFLRAE
HHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHH
VALSAEKDRYRQRLA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA