| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046211
Identifier: 78046211
GI number: 78046211
Start: 737564
End: 738073
Strand: Reverse
Name: 78046211
Synonym: XCV0655
Alternate gene names: NA
Gene position: 738073-737564 (Counterclockwise)
Preceding gene: 78046213
Following gene: 78046209
Centisome position: 14.25
GC content: 63.53
Gene sequence:
>510_bases GTGGGCGCTGTGCGCATTGGGCACCCGGGTACCCAGTCGCTGCGCATCGGACAGCTGGCTCGCGCCCGCCTGATTCGCCA ACTCGTGCCGGTCGGAACTGCGCTGACGGATCGCTTGCCGCAATGCCCGTTGTCGCGAGGTCATCGCCGGGGCAGCAAGG CAGTGCACGGCATTGATGACGACGCCAACAGCACCACATGCAATAGATCAAGCCTGCAGCCGCGCCTCAGATCACAACAT GGCGCCGCTAGCGCTGCCCCATTGCAGCGCAGCCGCACGCGGCATGCACTTGCCATGCTCCCGCCCGCTTTCCCGACCGC ACGCGTGACAAGCAACGTCGAGCGCACAACGTCGAGCGCACAAGACGGAGGACGAGCACGCAGAGACACGACGCCAGGCG AAAAAAATGGCCAACAGGAAGCAGGGCCAAACGCGACACTGACCTACTCTTCGTTGGCGCTACTATCAAGAGAACAAAAC GCGGTACAGGCGTGGACGCCCGTGTCTTGA
Upstream 100 bases:
>100_bases CAAGGGCATGGATGCGCCAGCGCATGGTGGGCAGGTCGCCCCATCATGGTGCGTCGGTGGTGGCGTGTAGACACCCACTG TCGAGACAAGCACCGAACGC
Downstream 100 bases:
>100_bases AAGACACGCGCCGACAAGTGGGACCGGCATGCGACGTGCTGTCACGGTGACGGCAGGTAGAGCTCATACCAGCGCAGTCG CACCGTCAGTACTCAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGAVRIGHPGTQSLRIGQLARARLIRQLVPVGTALTDRLPQCPLSRGHRRGSKAVHGIDDDANSTTCNRSSLQPRLRSQH GAASAAPLQRSRTRHALAMLPPAFPTARVTSNVERTTSSAQDGGRARRDTTPGEKNGQQEAGPNATLTYSSLALLSREQN AVQAWTPVS
Sequences:
>Translated_169_residues MGAVRIGHPGTQSLRIGQLARARLIRQLVPVGTALTDRLPQCPLSRGHRRGSKAVHGIDDDANSTTCNRSSLQPRLRSQH GAASAAPLQRSRTRHALAMLPPAFPTARVTSNVERTTSSAQDGGRARRDTTPGEKNGQQEAGPNATLTYSSLALLSREQN AVQAWTPVS >Mature_168_residues GAVRIGHPGTQSLRIGQLARARLIRQLVPVGTALTDRLPQCPLSRGHRRGSKAVHGIDDDANSTTCNRSSLQPRLRSQHG AASAAPLQRSRTRHALAMLPPAFPTARVTSNVERTTSSAQDGGRARRDTTPGEKNGQQEAGPNATLTYSSLALLSREQNA VQAWTPVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18058; Mature: 17926
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVRIGHPGTQSLRIGQLARARLIRQLVPVGTALTDRLPQCPLSRGHRRGSKAVHGIDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCCCCC DANSTTCNRSSLQPRLRSQHGAASAAPLQRSRTRHALAMLPPAFPTARVTSNVERTTSSA CCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QDGGRARRDTTPGEKNGQQEAGPNATLTYSSLALLSREQNAVQAWTPVS HCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GAVRIGHPGTQSLRIGQLARARLIRQLVPVGTALTDRLPQCPLSRGHRRGSKAVHGIDD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCCCCC DANSTTCNRSSLQPRLRSQHGAASAAPLQRSRTRHALAMLPPAFPTARVTSNVERTTSSA CCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QDGGRARRDTTPGEKNGQQEAGPNATLTYSSLALLSREQNAVQAWTPVS HCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA