Click here to switch to the map view.

The map label for this gene is yaiW [H]

Identifier: 78046200

GI number: 78046200

Start: 727553

End: 728644

Strand: Reverse

Name: yaiW [H]

Synonym: XCV0644

Alternate gene names: 78046200

Gene position: 728644-727553 (Counterclockwise)

Preceding gene: 78046205

Following gene: 78046198

Centisome position: 14.07

GC content: 68.68

Gene sequence:

>1092_bases
GTGATCTCACACCTGCCCCGCGCGCTCACCCTGCTCGCCATCGCCTTGCTGTCGGCCTGCGCCACACAGGCCCCGCGTGC
CCCGCAACGCTCGCCCGATGCGGTCAAGGCCGATATCGCGCAGCGCCTGCCGGCAACATTGCCCGACCGCGCCGGCTGGG
CCAACGATGTGTATGTGGCGCTGTCCTCGCAGGCGTTGGACACCAGCGCCGAGCACATCTGCGCAGTGCTGGCGGTGACC
GAGCAGGAATCGACTTACCAGGCCAATCCGGTCGTGCCCAACCTGGGCAAGATCTCGCGTGCCGAGATCGACCGCCGCGC
CAGCGCGCATCACATTCCCGGCTTCATGGTCGATGCCGCCCTGCGTCTGAGTTCGCCGGATGGGCGCAGCTATGCCACGC
GCATCGCTGCCGCGCGCACCGAACAGGAACTGAGCCGCATCTTCGAAGACTTCACCGGCAGCGTGCCGCTGGGCGCGCGG
CTGTTCGACGGATTCAACCCGGTGCATACCGCCGGGCCGATGCAGGTGAGCATCGCCTTCGCCGAGCAGCATGCGCAGCG
CTACCCCTACCCGCCCGGCGATTCAATCCGCCACGAAGTCTTCAGCCGCCGTGGCGGGCTGTGGTTCGGTACCCAGCATC
TGCTGGGCTATCCCGCCAACTACGACGCGCTGCTGTACCGCTTCGCCGATTTCAACGCCGGCTGGTACGCCAGCCGCAAT
GCCGCCTTCCAGGCCGCGCTGAGCAGGGCCAGCGGCATCGCGCTAGCCCTGGACGGCGACCTGCTCACGCCGGGCGCCAG
CCTGGATGCGCCCGGCAGCACCGAGCGCGCCGCACGCAGCCTGGGCAGCCAGTTGGCGATGAGCGACCGGCAGCTCCGCC
GCGCACTGGAGGCCGGCAACACCGCAGATTTCGCGGACTCCGACCTGTATCGCCAGGTGTTCGCGTTGGCAGAGCGCAGC
GCCGGCAAGCCGCTGCCGCGTGCCGTGTTGCCCGGCATCACCCTGGAAAGCCCAAAGATCACCCGCACGCTCACCACCGC
CTGGTTTGCGCAGCGGGTGAACGAACGCTGGAAGCGCTGCATGAGCAAGTAG

Upstream 100 bases:

>100_bases
ACGAGACGGCAACCCCACGCGCCGGTGGGTGAAGCTCCCCCGGCGCGGCCGCGTAAACTGCCGCACGGCAGCTGCCGCCC
CTCGATCTTCCGGAGACGCC

Downstream 100 bases:

>100_bases
ACGAGCGGGCCGCCGCGCTGCCGGCGCTGCGCTCTGTCGCCTCATTCGGTGCTCAGGCGATTGGTCAACACATCGCCGAC
AACCGGGCCGTCTTCCACCT

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MISHLPRALTLLAIALLSACATQAPRAPQRSPDAVKADIAQRLPATLPDRAGWANDVYVALSSQALDTSAEHICAVLAVT
EQESTYQANPVVPNLGKISRAEIDRRASAHHIPGFMVDAALRLSSPDGRSYATRIAAARTEQELSRIFEDFTGSVPLGAR
LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPANYDALLYRFADFNAGWYASRN
AAFQAALSRASGIALALDGDLLTPGASLDAPGSTERAARSLGSQLAMSDRQLRRALEAGNTADFADSDLYRQVFALAERS
AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK

Sequences:

>Translated_363_residues
MISHLPRALTLLAIALLSACATQAPRAPQRSPDAVKADIAQRLPATLPDRAGWANDVYVALSSQALDTSAEHICAVLAVT
EQESTYQANPVVPNLGKISRAEIDRRASAHHIPGFMVDAALRLSSPDGRSYATRIAAARTEQELSRIFEDFTGSVPLGAR
LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPANYDALLYRFADFNAGWYASRN
AAFQAALSRASGIALALDGDLLTPGASLDAPGSTERAARSLGSQLAMSDRQLRRALEAGNTADFADSDLYRQVFALAERS
AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK
>Mature_363_residues
MISHLPRALTLLAIALLSACATQAPRAPQRSPDAVKADIAQRLPATLPDRAGWANDVYVALSSQALDTSAEHICAVLAVT
EQESTYQANPVVPNLGKISRAEIDRRASAHHIPGFMVDAALRLSSPDGRSYATRIAAARTEQELSRIFEDFTGSVPLGAR
LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPANYDALLYRFADFNAGWYASRN
AAFQAALSRASGIALALDGDLLTPGASLDAPGSTERAARSLGSQLAMSDRQLRRALEAGNTADFADSDLYRQVFALAERS
AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786576, Length=347, Percent_Identity=55.6195965417867, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011673
- ProDom:   PD041438 [H]

Pfam domain/function: PF07759 DUF1615 [H]

EC number: NA

Molecular weight: Translated: 39385; Mature: 39385

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISHLPRALTLLAIALLSACATQAPRAPQRSPDAVKADIAQRLPATLPDRAGWANDVYVA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
LSSQALDTSAEHICAVLAVTEQESTYQANPVVPNLGKISRAEIDRRASAHHIPGFMVDAA
EECHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LRLSSPDGRSYATRIAAARTEQELSRIFEDFTGSVPLGARLFDGFNPVHTAGPMQVSIAF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEHH
AEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPANYDALLYRFADFNAGWYASRN
HHHHHHCCCCCCCHHHHHHHHHHCCCCEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
AAFQAALSRASGIALALDGDLLTPGASLDAPGSTERAARSLGSQLAMSDRQLRRALEAGN
HHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TADFADSDLYRQVFALAERSAGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRC
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MSK
HCC
>Mature Secondary Structure
MISHLPRALTLLAIALLSACATQAPRAPQRSPDAVKADIAQRLPATLPDRAGWANDVYVA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
LSSQALDTSAEHICAVLAVTEQESTYQANPVVPNLGKISRAEIDRRASAHHIPGFMVDAA
EECHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LRLSSPDGRSYATRIAAARTEQELSRIFEDFTGSVPLGARLFDGFNPVHTAGPMQVSIAF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEHH
AEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPANYDALLYRFADFNAGWYASRN
HHHHHHCCCCCCCHHHHHHHHHHCCCCEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
AAFQAALSRASGIALALDGDLLTPGASLDAPGSTERAARSLGSQLAMSDRQLRRALEAGN
HHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TADFADSDLYRQVFALAERSAGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRC
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MSK
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]