Click here to switch to the map view.

The map label for this gene is icfG [H]

Identifier: 78046162

GI number: 78046162

Start: 684471

End: 686579

Strand: Reverse

Name: icfG [H]

Synonym: XCV0606

Alternate gene names: 78046162

Gene position: 686579-684471 (Counterclockwise)

Preceding gene: 78046171

Following gene: 78046161

Centisome position: 13.26

GC content: 68.28

Gene sequence:

>2109_bases
GTGAGGATGAGGCTGCCAGGGAGAGTTGTGCGTGGCAGCAAAGCTGCCATGATCCAGCGCAGCCGCTGCCACGAAGAATG
CGCCATGCGCAACCGCCCGCGATCACTGCCACCCCAGACATCGGTCGCCGCGCGCATGCCCTGGCGCCGCAGCTTGCGCA
TGCGTGTGCTGCTGGCGGCCACCGCAGTGCTGGTGGCCCTGCTGACGGTGCTGGGCACGGTGTTCTACCTGGGCGCACGC
GCCGAGCTGGTGGAGGCGGCGCGTACCGAGGTGGATGGCCTGACCGAACAGACCGCGCGCAGCCTGGCGGCCTTGCTCGA
TTCGGTGCAGGTGAGCGGGCGCACGCTGGCCGCCAGCAGTAGCGGCGTGGGGCTGCAGCCGTTCAATCTGCGTGCGTTGC
TGCTGGCCACGCTCACCGGCGACCCGGATATCGGGGCGGCGCGGCTGATCATCGCACCGCGTACGCAAAAGGCCGGCGAC
AGCGGGTTTGTGTGGTACGTGCACCGCAGCGGCACGCGCATCGCAGAAAAATCCGCGCTGGAACTGGGTTATGACTATCG
CGCGATGCCCTGGTATCTGCGCACCCAGCGCGAGGGCCGCGCATGGTGGTCCGAGCCCTACCTGGATGCCAACGGCGGCG
GCCTGTACACCAGCTACAACCTGCCGCTGCGCCGGCCTGGCGATGCACCGGATACGGCGCCGGTCGGCATGGTGAGCGTG
GATCTGCCGCTGCAGCATCTGCGCGAGATCATCGATCAGCTGCCGCGCGATATCGGCATCCAGACGATGCTGCTGTCGCC
GGAAGGCCTGCTGGTCTTCAGCCCCGACCCGGCACTGAATCTGCGCCATTCGCTCACGGCCTACGTGGCCCGGTCGCGCC
CGGATCTGCGGCCATTGCAGCGCGCCGTCGCTGCCGGCCAGCCGATCTCGTTTTCGCATACCGCGCCCGATGGCGAGCGC
TTTCTGACCCACAGCGCGGCGGTGGGGCGCAGCGGCTGGACCTTCGTGCTGTCGGCCTCCGAAGGCTACGTGCTGGCCGG
CCTGAACTGGCTGGCGGCGTGGGTGGCGCTGGCCGCGCTGCTGGGCGCGTTGGTGTGGTGGTGGTTGATGCGGCGGATCA
CGCGCAAGTTGACGCGGCCGATCGAAGAACTGACGGACACCGCCGAGCACTTCCGGCGCGGCGAATTCGAATACCCGTTG
CAGCACATCGAACGCGACGACGAGGTAGGCGTGATGGCACGCGCCTTCGACAGCGCACGCGATGCGATCCGCCATCACAT
CGCCGAGATCGGCGAGATGACCGCCGCGCGCGAACGCATGCACAGCGAGCTGCAGATTGCGCGCGAGATCCAGCAGGCGA
TGCTGCCTTCCGGGCGCACCTTCGACCGCGCCAGTTCGCATCTGGAAACCTGCGCATGGCTGGAGCCGGCCAAGGCGGTG
GGCGGAGATTTCTACCACTTCGTGGAAACCGAACCGGGCCTGCTGTGGTTCGTGGTGGGCGATGTCTCCGACAAGGGCGT
GCCGGCGGCCTTGTTCATGGCGCGCGCGGTGAGCGTGCTGGAGATTGCCGCACGGCGGTACACGCGCCCGGACGCGATTT
TGATTGCCGCCTCCACGCGGTTGGCCGAAAACAACGAGACCTGCATGTTCGCCACCGTGCTGTGCGGCCTGATCAACGTG
GTCAGCGGCGACTACTGGCTGGCCAGCGCCGGGCACGAGCCGCCCTTGTTGATCGATATCGATGGCAAGGCGCGCCCGTT
GCCGCTGGAAACCGGTGCACCGCTGGGGATCGAGCCGCAGGAATCCTACCCGGTGCTGCAGGGCCGCATGAGCGCAGGGC
AGACCTTGCTGGGCTACACCGATGGCGTGACCGAGGCGATGGACGAGCGCGGCGCCAGCTACGGACTGGAGCGGTTGCTG
ACGGCGCTGCACCCGCGCCGCAGCGCGGCGGCGCAGTGCAAGGCGGTGATCGCCAATATCGCCCGTTTCACCGGCACGGC
CGATCCGTACGACGACATCACGCTGCTGGCGATCCGGCTGCGCCAGGAGCATGCTGGGCGGGTCGCACACGCTGGCCGGG
ACGCGCCCGGAAAGGCAACGACTGCATGA

Upstream 100 bases:

>100_bases
GCCAGCAGGCTTGGGGTCAACATCTGGCGCAAGGCCGGCCTCCGTGGCAGGTGGGCGGCCAATCTAGTCCGCTCGCGTTC
GGCCGGTCAATCGAGACCTC

Downstream 100 bases:

>100_bases
AGCTCGATTTGGCCATCGCGCCATCGCTGGCCCAGCTGGCGGGCGCCAACGATGCGCTGGAACAATCGCTCACGCTCGAG
GGCCTACACGCCGAGCGCAT

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MRMRLPGRVVRGSKAAMIQRSRCHEECAMRNRPRSLPPQTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGAR
AELVEAARTEVDGLTEQTARSLAALLDSVQVSGRTLAASSSGVGLQPFNLRALLLATLTGDPDIGAARLIIAPRTQKAGD
SGFVWYVHRSGTRIAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYLDANGGGLYTSYNLPLRRPGDAPDTAPVGMVSV
DLPLQHLREIIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLTAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGER
FLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGALVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPL
QHIERDDEVGVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAV
GGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINV
VSGDYWLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGLERLL
TALHPRRSAAAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA

Sequences:

>Translated_702_residues
MRMRLPGRVVRGSKAAMIQRSRCHEECAMRNRPRSLPPQTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGAR
AELVEAARTEVDGLTEQTARSLAALLDSVQVSGRTLAASSSGVGLQPFNLRALLLATLTGDPDIGAARLIIAPRTQKAGD
SGFVWYVHRSGTRIAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYLDANGGGLYTSYNLPLRRPGDAPDTAPVGMVSV
DLPLQHLREIIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLTAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGER
FLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGALVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPL
QHIERDDEVGVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAV
GGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINV
VSGDYWLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGLERLL
TALHPRRSAAAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA
>Mature_702_residues
MRMRLPGRVVRGSKAAMIQRSRCHEECAMRNRPRSLPPQTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGAR
AELVEAARTEVDGLTEQTARSLAALLDSVQVSGRTLAASSSGVGLQPFNLRALLLATLTGDPDIGAARLIIAPRTQKAGD
SGFVWYVHRSGTRIAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYLDANGGGLYTSYNLPLRRPGDAPDTAPVGMVSV
DLPLQHLREIIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLTAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGER
FLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGALVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPL
QHIERDDEVGVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAV
GGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINV
VSGDYWLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGLERLL
TALHPRRSAAAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 76930; Mature: 76930

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMRLPGRVVRGSKAAMIQRSRCHEECAMRNRPRSLPPQTSVAARMPWRRSLRMRVLLAA
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH
TAVLVALLTVLGTVFYLGARAELVEAARTEVDGLTEQTARSLAALLDSVQVSGRTLAASS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECC
SGVGLQPFNLRALLLATLTGDPDIGAARLIIAPRTQKAGDSGFVWYVHRSGTRIAEKSAL
CCCCCCCCCHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHH
ELGYDYRAMPWYLRTQREGRAWWSEPYLDANGGGLYTSYNLPLRRPGDAPDTAPVGMVSV
HCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
DLPLQHLREIIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLTAYVARSRPDLRPLQ
CCCHHHHHHHHHHCCHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH
RAVAAGQPISFSHTAPDGERFLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAAL
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHH
LGALVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPLQHIERDDEVGVMARAFDSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH
GGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTR
CCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCE
LAENNETCMFATVLCGLINVVSGDYWLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQ
ECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
ESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGLERLLTALHPRRSAAAQCKAVIANI
CCCCHHHHHHCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA
HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRMRLPGRVVRGSKAAMIQRSRCHEECAMRNRPRSLPPQTSVAARMPWRRSLRMRVLLAA
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH
TAVLVALLTVLGTVFYLGARAELVEAARTEVDGLTEQTARSLAALLDSVQVSGRTLAASS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECC
SGVGLQPFNLRALLLATLTGDPDIGAARLIIAPRTQKAGDSGFVWYVHRSGTRIAEKSAL
CCCCCCCCCHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHH
ELGYDYRAMPWYLRTQREGRAWWSEPYLDANGGGLYTSYNLPLRRPGDAPDTAPVGMVSV
HCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
DLPLQHLREIIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLTAYVARSRPDLRPLQ
CCCHHHHHHHHHHCCHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH
RAVAAGQPISFSHTAPDGERFLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAAL
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHH
LGALVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPLQHIERDDEVGVMARAFDSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHH
GGDFYHFVETEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTR
CCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCE
LAENNETCMFATVLCGLINVVSGDYWLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQ
ECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
ESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGLERLLTALHPRRSAAAQCKAVIANI
CCCCHHHHHHCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA
HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]