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The map label for this gene is bsn [H]

Identifier: 78046125

GI number: 78046125

Start: 637698

End: 639488

Strand: Reverse

Name: bsn [H]

Synonym: XCV0569

Alternate gene names: 78046125

Gene position: 639488-637698 (Counterclockwise)

Preceding gene: 78046128

Following gene: 78046124

Centisome position: 12.35

GC content: 68.45

Gene sequence:

>1791_bases
ATGAGGTTGCCGTCCCGTTTCGTGTCCCTGCGTTGCACCCTTCCCCTGGCCTGCGCGTTCGCGCTCGGTGCCACCTCCGC
CAATGCGGCGGTCTTCATCAACGAACTGCACTACGACGACGTGGGCGCCTCCGGCGACAGCGGCGAGGGTGTGGAAGTGG
TGGCCACCGCCGGCGAATCGCTGAGCGGTTACCGCATCTACCTGTACAACGGCAACAGCCCCAGTGCGGCAGTGGTGTAC
GCCAATACGGCGGTGCCGGCCGGCACGGTGGTCAGCTGCGGCAGCCAGGTGCGTATGGCCACGGTGAGCTATGCCAGCAA
CGGCGTGCAGAACGGCCCCAACGACGGCGTGGCGCTGGTCGACCCCAACGGGCAGCTGGTGCAGTTCCTCAGTTATGAAG
GCGCCATCACCGGCAGCGGCGGCCCGGCGGCCGGCGTGACCAGCCAGAACCTGCCGGTGAGCGAGAGCAACAGCACCGCG
GTCGGCAGTTCGCTGCAATTGACCGGTACCGGCAGCAGCGCGGCCAACTTCAGCTGGGCCGGCTCGGCGGCACAGACCTT
CGGCGCCTGCAACCGCGGCCAGACCTTCACCGGCAGCGACGGCGGTGGAAGTACCGGTGCTCCCACCATCAGCAGCACCA
CACCAACGCAAGGCGCCACCGGCTTTCCGGCTGCCGGCGATCTGGCCGTGGGTTTCAGCGAAGCGGTGACGCTGGGCAGC
GGTGCGTTTGCGCTGAGCTGCGCCAGCTCCGGCAACGTGGCGCTGACGTACCCGACCAGCGGCACCCGCTTCACCCTGTC
CACCAACACCGCCCTGGTCGGCGGCGAGCGCTGCACGCTGGCCATCACCGCCAGCGCCATCCGCGATGCCAGCGGCCTGA
GCCCGGCCGCCAACCAGTCCATCGCCTTCACCGTGGCCACCGCCAGCGGCGGCGGTACCGGGTACTACGCGCGGGTCAAT
ACCGCCAGCGCCAGCCAGCTGCGCTGCTCGTTGCACGCCACCATCAAGGGGCACACGGTCTACCCGTACAGCGGCAGCGG
CACCAGCACCTGGACCATCCTGGAAATGGCCGACGAGGATCCCAACAACAGCGGCCGCATTTTGGACGCCTACCGCAACC
GCAGCTACGCCAAGGTCAGCGACCGCGCCGGCACCGGCAGCGGGCTCACCTACAACCGCGAGCACACCTGGCCCAACTCG
CTGGGCTTTGGCAGCGCCACCGGCGACCGCGGCCTGCCGTACGCGCCCTATACCGACACCCACATGCTGTACCTGACCGA
CACCAGCTTCAACGCAGACCGCGGCAACAAGCCCTATGCCACCTGCACCAGCAGCTGCGGCGAGCGGGTGACCGAGGTCA
ACGACGGCAGTGGCGGCGGCAGCGGACGATACCCGGGCAATTCCAACTGGGTCCGCACGCCCGACGGCAACAGCGGCACC
TTCGAGGTGTGGGGCCGGCGCAAGGGCGACATGGCGCGCGCGGTGATGTACATGGCCATCCGCTATGAAGGCGGGCTGGA
TGCGGCTACCGGACAATCCGAGCCGGACCTGGAGCTGACCGACGACCGCAGCAAGATCGTGCAGACCGCAGCCTCACCGG
CCTACATGGGCCTGCTCTCCACCCTGCTGGCCTGGCATCAGGCCGACCCACCAGACGATGCCGAGCGCGCCCGCAACGAG
GTGATCTTCAGCTTCCAGGGCAACCGCAACCCGTTCGTGGATCACCCCGAATGGGCCACCGCCAGCCTGTTCAACTCGGC
CAAGCCGGCCAGTTGCCAGCTGGCCAACTAA

Upstream 100 bases:

>100_bases
GAGTCTCGTCCAATGCTCTAGAAATGGAACCAGGTTCCATCGCCTATCATGCGCGCGCCTTACAGTCGGGAACGCATTCC
CCGATCACAAGGAGCTGTCG

Downstream 100 bases:

>100_bases
GACCGGCTCACGCACGTCGCGCGCAGTCGCCAGGCGGGGTGAACGGCACGCTCGGAACCGCACTGTACGCGTGGTACATG
CCGATTCCGGGCCCCGCCCG

Product: putative extracellular ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEGVEVVATAGESLSGYRIYLYNGNSPSAAVVY
ANTAVPAGTVVSCGSQVRMATVSYASNGVQNGPNDGVALVDPNGQLVQFLSYEGAITGSGGPAAGVTSQNLPVSESNSTA
VGSSLQLTGTGSSAANFSWAGSAAQTFGACNRGQTFTGSDGGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGS
GAFALSCASSGNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQSIAFTVATASGGGTGYYARVN
TASASQLRCSLHATIKGHTVYPYSGSGTSTWTILEMADEDPNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNS
LGFGSATGDRGLPYAPYTDTHMLYLTDTSFNADRGNKPYATCTSSCGERVTEVNDGSGGGSGRYPGNSNWVRTPDGNSGT
FEVWGRRKGDMARAVMYMAIRYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLSTLLAWHQADPPDDAERARNE
VIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN

Sequences:

>Translated_596_residues
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEGVEVVATAGESLSGYRIYLYNGNSPSAAVVY
ANTAVPAGTVVSCGSQVRMATVSYASNGVQNGPNDGVALVDPNGQLVQFLSYEGAITGSGGPAAGVTSQNLPVSESNSTA
VGSSLQLTGTGSSAANFSWAGSAAQTFGACNRGQTFTGSDGGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGS
GAFALSCASSGNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQSIAFTVATASGGGTGYYARVN
TASASQLRCSLHATIKGHTVYPYSGSGTSTWTILEMADEDPNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNS
LGFGSATGDRGLPYAPYTDTHMLYLTDTSFNADRGNKPYATCTSSCGERVTEVNDGSGGGSGRYPGNSNWVRTPDGNSGT
FEVWGRRKGDMARAVMYMAIRYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLSTLLAWHQADPPDDAERARNE
VIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN
>Mature_596_residues
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEGVEVVATAGESLSGYRIYLYNGNSPSAAVVY
ANTAVPAGTVVSCGSQVRMATVSYASNGVQNGPNDGVALVDPNGQLVQFLSYEGAITGSGGPAAGVTSQNLPVSESNSTA
VGSSLQLTGTGSSAANFSWAGSAAQTFGACNRGQTFTGSDGGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGS
GAFALSCASSGNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQSIAFTVATASGGGTGYYARVN
TASASQLRCSLHATIKGHTVYPYSGSGTSTWTILEMADEDPNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNS
LGFGSATGDRGLPYAPYTDTHMLYLTDTSFNADRGNKPYATCTSSCGERVTEVNDGSGGGSGRYPGNSNWVRTPDGNSGT
FEVWGRRKGDMARAVMYMAIRYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLSTLLAWHQADPPDDAERARNE
VIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN

Specific function: Mg(2+)-activated ribonuclease which hydrolyzes RNA apparently nonspecifically into oligonucleotides with 5'-terminal phosphate [H]

COG id: COG2356

COG function: function code L; Endonuclease I

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007346 [H]

Pfam domain/function: PF04231 Endonuclease_1 [H]

EC number: NA

Molecular weight: Translated: 61222; Mature: 61222

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEGVEVVATAGES
CCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCC
LSGYRIYLYNGNSPSAAVVYANTAVPAGTVVSCGSQVRMATVSYASNGVQNGPNDGVALV
CCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCEEEEEEEHHCCCCCCCCCCCEEEE
DPNGQLVQFLSYEGAITGSGGPAAGVTSQNLPVSESNSTAVGSSLQLTGTGSSAANFSWA
CCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEC
GSAAQTFGACNRGQTFTGSDGGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGS
CCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHEEECC
GAFALSCASSGNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQS
CCEEEEECCCCCEEEEECCCCCEEEEECCEEEECCCEEEEEEEEHHHHCCCCCCCCCCCE
IAFTVATASGGGTGYYARVNTASASQLRCSLHATIKGHTVYPYSGSGTSTWTILEMADED
EEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCCEEEEEEEECCC
PNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNSLGFGSATGDRGLPYAPYTDT
CCCCCCEEEHHCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HMLYLTDTSFNADRGNKPYATCTSSCGERVTEVNDGSGGGSGRYPGNSNWVRTPDGNSGT
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCE
FEVWGRRKGDMARAVMYMAIRYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLS
EEEECCCCCHHHHEEEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHH
TLLAWHQADPPDDAERARNEVIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN
HHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEGVEVVATAGES
CCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCC
LSGYRIYLYNGNSPSAAVVYANTAVPAGTVVSCGSQVRMATVSYASNGVQNGPNDGVALV
CCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCEEEEEEEHHCCCCCCCCCCCEEEE
DPNGQLVQFLSYEGAITGSGGPAAGVTSQNLPVSESNSTAVGSSLQLTGTGSSAANFSWA
CCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEC
GSAAQTFGACNRGQTFTGSDGGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGS
CCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHEEECC
GAFALSCASSGNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQS
CCEEEEECCCCCEEEEECCCCCEEEEECCEEEECCCEEEEEEEEHHHHCCCCCCCCCCCE
IAFTVATASGGGTGYYARVNTASASQLRCSLHATIKGHTVYPYSGSGTSTWTILEMADED
EEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCCEEEEEEEECCC
PNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNSLGFGSATGDRGLPYAPYTDT
CCCCCCEEEHHCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HMLYLTDTSFNADRGNKPYATCTSSCGERVTEVNDGSGGGSGRYPGNSNWVRTPDGNSGT
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCE
FEVWGRRKGDMARAVMYMAIRYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLS
EEEECCCCCHHHHEEEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHH
TLLAWHQADPPDDAERARNEVIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN
HHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1396690 [H]