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The map label for this gene is coq7 [H]

Identifier: 78046078

GI number: 78046078

Start: 588774

End: 589469

Strand: Reverse

Name: coq7 [H]

Synonym: XCV0522

Alternate gene names: 78046078

Gene position: 589469-588774 (Counterclockwise)

Preceding gene: 78046084

Following gene: 78046075

Centisome position: 11.38

GC content: 69.68

Gene sequence:

>696_bases
ATGGCGGTTGGCAGCACGGCGGAGCGGGGCCAGAATCGCCGTATGACCCAGATCTCCCCCACCCGCCTGCATAGCCCGCT
CGACCGGCTGCTGGTCGAAGCCCAGCGCGCGCTGGACACCGTCTTCGGCAATCCGCCGGCCGAGCGTCCCAATCCCGCCG
CCGACACGCCCGACGTCGTCCTGGACCCGGAGCAGCGTCGTCATGCGGCCGGCCTGATGCGCATCAACCATGTTGGCGAG
GTGTGCGCGCAAGGCCTGTATTTCGGCCAGGCCGCCGTCGCCCGCGACGCACACACCCAGCACCACCTGCTGGAAGCTGC
CCAGGAAGAAACGGATCACCTGGCCTGGTGCGCCGACCGCCTGCACGAGCTGGACAGCCGCCCCAGCCTGTTCAACCCCG
TGTGGTACGCCGGCAGCTACGCGCTCGGCGCGCTGGCCGGGCTGCGCGGCGACGACTGGAGCCTGGGATTCGTGGTCGAG
ACCGAACGCCAGGTCGAAGCGCACCTGGACGAGCATCTGGAAACCCTGCCCCAGAACGACCAACGCAGCCGCGCCATCCT
GCGCGTGATGAAGATCGACGAGGCCCGCCATGCCGACCAGGCCGAGCAGGCTGGCGCCCGCCCGCTCCCGGCTCCGATCC
CAAGCGCGATGGCCCTGGCCTCCAAGCTGATGAAGACGGTTGCTTACCGCCTCTAG

Upstream 100 bases:

>100_bases
TGACCACTGGAACTTTGCCACGCGTTGTGAAGGCGAAACAGAAGAGCCGGGATTGTACGGGACGTTCGGCGGCTGCGCAA
GTTGCAGCAACAACTGCGCC

Downstream 100 bases:

>100_bases
TTGGGAATTGGAAATTGGGAATCGGGGACTGGGGACTGACGACCAGAATCTAGCCCGTACCCGAGTACACCCGACACGGC
GATCAACCGCTGGCCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAVGSTAERGQNRRMTQISPTRLHSPLDRLLVEAQRALDTVFGNPPAERPNPAADTPDVVLDPEQRRHAAGLMRINHVGE
VCAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADRLHELDSRPSLFNPVWYAGSYALGALAGLRGDDWSLGFVVE
TERQVEAHLDEHLETLPQNDQRSRAILRVMKIDEARHADQAEQAGARPLPAPIPSAMALASKLMKTVAYRL

Sequences:

>Translated_231_residues
MAVGSTAERGQNRRMTQISPTRLHSPLDRLLVEAQRALDTVFGNPPAERPNPAADTPDVVLDPEQRRHAAGLMRINHVGE
VCAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADRLHELDSRPSLFNPVWYAGSYALGALAGLRGDDWSLGFVVE
TERQVEAHLDEHLETLPQNDQRSRAILRVMKIDEARHADQAEQAGARPLPAPIPSAMALASKLMKTVAYRL
>Mature_230_residues
AVGSTAERGQNRRMTQISPTRLHSPLDRLLVEAQRALDTVFGNPPAERPNPAADTPDVVLDPEQRRHAAGLMRINHVGEV
CAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADRLHELDSRPSLFNPVWYAGSYALGALAGLRGDDWSLGFVVET
ERQVEAHLDEHLETLPQNDQRSRAILRVMKIDEARHADQAEQAGARPLPAPIPSAMALASKLMKTVAYRL

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol [H]

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566 [H]

Pfam domain/function: PF03232 COQ7 [H]

EC number: NA

Molecular weight: Translated: 25520; Mature: 25389

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGSTAERGQNRRMTQISPTRLHSPLDRLLVEAQRALDTVFGNPPAERPNPAADTPDVV
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
LDPEQRRHAAGLMRINHVGEVCAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHELDSRPSLFNPVWYAGSYALGALAGLRGDDWSLGFVVETERQVEAHLDEHLETLPQND
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC
QRSRAILRVMKIDEARHADQAEQAGARPLPAPIPSAMALASKLMKTVAYRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVGSTAERGQNRRMTQISPTRLHSPLDRLLVEAQRALDTVFGNPPAERPNPAADTPDVV
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
LDPEQRRHAAGLMRINHVGEVCAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHELDSRPSLFNPVWYAGSYALGALAGLRGDDWSLGFVVETERQVEAHLDEHLETLPQND
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC
QRSRAILRVMKIDEARHADQAEQAGARPLPAPIPSAMALASKLMKTVAYRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]