| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046041
Identifier: 78046041
GI number: 78046041
Start: 550195
End: 550746
Strand: Reverse
Name: 78046041
Synonym: XCV0485
Alternate gene names: NA
Gene position: 550746-550195 (Counterclockwise)
Preceding gene: 78046043
Following gene: 78046037
Centisome position: 10.64
GC content: 68.12
Gene sequence:
>552_bases ATGATCCCACGCAAGACCGAGCTCGCCCTAACCACGTTGCAATCGCACCGCAGCCCGCTGACGCTGCTGCAACGGCGCGC GTTGATCCTGGCCGACGGCCAGCGCGATCTGGCCACGCTCGCCACGCTGCTGGGCGGCGACGGCACCGGCTTGGTGCAGA GCCTGTGCGCGATGGGGTATCTGGATCTTGGACCCGCTGCATGCGGTGCTGCGGGTCAAACGCGCACGGCAGCCACTGCC GCGCTGCCCGATGTGCACGAAGCACCCGTGGCCCTACCGGACGCAGGACCCAGCGAAGAAGAGCTGCGGCGCCTGCGTCG CCGTGCAGCGACCAATGCACGCCTGTACTTGCTCGATATCCTGCAGTTGCAACGCAATGCCCTTGCCGCTGCGCTGCATC GGCAACTGCACGCCGCGCGCGACGACGATCAGATCCGCACGACCATCGCCGAGGCGTTGCACGCGCTGCCGCAGATCACC TCGGCGAGCTACGCCGAACGCGTCCGCACACGGATCGGCGAGCTGCTGCCGGAGACCTTGCAAGCCGCGTGA
Upstream 100 bases:
>100_bases CATCGCGAGCATGTGCAGAGCGTGGCCACACACCGTCGCCGCCATGTCATCGGCGCTTCATTGGCGGGCGTCACGCTATT GGCTTCGCAGGACCGCCGCC
Downstream 100 bases:
>100_bases TATGGCAGTGGTGGCCAGCGCGCGCCGACCGGCTCTTGCCGAGTCGCTCAACATGCGCAGGGGCTGGAGCCGAGCGCCGC ATCACCGCAACGCCAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MIPRKTELALTTLQSHRSPLTLLQRRALILADGQRDLATLATLLGGDGTGLVQSLCAMGYLDLGPAACGAAGQTRTAATA ALPDVHEAPVALPDAGPSEEELRRLRRRAATNARLYLLDILQLQRNALAAALHRQLHAARDDDQIRTTIAEALHALPQIT SASYAERVRTRIGELLPETLQAA
Sequences:
>Translated_183_residues MIPRKTELALTTLQSHRSPLTLLQRRALILADGQRDLATLATLLGGDGTGLVQSLCAMGYLDLGPAACGAAGQTRTAATA ALPDVHEAPVALPDAGPSEEELRRLRRRAATNARLYLLDILQLQRNALAAALHRQLHAARDDDQIRTTIAEALHALPQIT SASYAERVRTRIGELLPETLQAA >Mature_183_residues MIPRKTELALTTLQSHRSPLTLLQRRALILADGQRDLATLATLLGGDGTGLVQSLCAMGYLDLGPAACGAAGQTRTAATA ALPDVHEAPVALPDAGPSEEELRRLRRRAATNARLYLLDILQLQRNALAAALHRQLHAARDDDQIRTTIAEALHALPQIT SASYAERVRTRIGELLPETLQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19619; Mature: 19619
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRKTELALTTLQSHRSPLTLLQRRALILADGQRDLATLATLLGGDGTGLVQSLCAMGY CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC LDLGPAACGAAGQTRTAATAALPDVHEAPVALPDAGPSEEELRRLRRRAATNARLYLLDI HHCCHHHCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH LQLQRNALAAALHRQLHAARDDDQIRTTIAEALHALPQITSASYAERVRTRIGELLPETL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAA HCC >Mature Secondary Structure MIPRKTELALTTLQSHRSPLTLLQRRALILADGQRDLATLATLLGGDGTGLVQSLCAMGY CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC LDLGPAACGAAGQTRTAATAALPDVHEAPVALPDAGPSEEELRRLRRRAATNARLYLLDI HHCCHHHCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH LQLQRNALAAALHRQLHAARDDDQIRTTIAEALHALPQITSASYAERVRTRIGELLPETL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA