Click here to switch to the map view.

The map label for this gene is hpaG [H]

Identifier: 78045964

GI number: 78045964

Start: 459955

End: 461253

Strand: Reverse

Name: hpaG [H]

Synonym: XCV0408

Alternate gene names: 78045964

Gene position: 461253-459955 (Counterclockwise)

Preceding gene: 78045965

Following gene: 78045963

Centisome position: 8.91

GC content: 63.9

Gene sequence:

>1299_bases
ATGGTCCCGTTGGACGAATTGCCCGCAGACTTGGGGCGCATGCAGGGTCTTCGCAACCTCTCGCTGGGTGGTGGGCACTA
TGCGCGTCTGCCGGCCCGCATCGTTGAGCTGAGCAGGTTGAGCGAGTTGCGCATGTCGCACTCGTCGCATTTTCGCCAGT
TGCCTGAAAACATCGGCCTCATGCAGGGGCTCAGGTCACTGGAGGTGGCATCGAATTCCAAGCTGGAGCAGCTTCCAGGC
AGCCTCACGCAGCTGCATCGGCTGGAAAAACTCGACCTCTCATCCAACCGCCGGCTGGCACACTTGCCTGAGGACATCGG
GCAACTGCGCGGCTTGACGGAACTGTCGCTGAGAAGTTGCACTGCGCTGCAGCAGCTGCCCGACAGCGTGGGGGATCTGG
CCCAGCTGCAACTGCTGGACCTGCGCGACACGGGCCTGCAGACTCTTCCACAGTCGCTGGCACGACTGCCCGCTCAATGC
GATATCAAGGTGCCGGATCATCTGGCAGACCGATTGCTGCAGATCCGCGACCCGGAGCGGGCGCAGCGCCAGGCACAGCG
CGCGGCACAGCGGCTGGCCGAGCGGAGACGACGCGCGCCCGTGCCGGCGGCGCAACAGGCCGGGTCGTCGTGGAACCGCG
TCCCCGAGTTCACGCGCGTGTTGCGCAGTGTCGATGCCGACCTGGGCGAGCGTTTTGAGAAATGGACGCAAGGCCTGATG
CAAAATGCCAGGATGTTTGGCGCATCCATCACATCGGCCGACATGCCCCTGCTGGACCAGGTGGTAGCCGAGGCCATTCG
GTCACCCGAATTCCGCAGCAGCTTCGGCCAATTCTTGAGCGACCACACCATCAAGACGCTCAACCTGGATGGCATGACGC
AAGTGGGTGGGCGCGGGCCCGCCGTGCGAGGAGACGCCAAAACCGCGTTTGCCGAGATGCTCAAGCACAAGCTCATGCAC
ACGCAGGACCACGAGACCGCACTGGGCCTGCTGCTGGAAGCCCTGAGGAATTCCGACCTGGGGCTGTCCAGGCAGACGCT
GCTGCGCAGCAGGAATGAACTCACCGGGCGTGTGGAAATGTGGCCGCCACTGAAGGCCTACATCTCCATGCACGATGTGG
AAGGAAAAGCGGCGCAGGATGCGGCGATCACGTGGGCGATGGCCCAGCTTGACGAAGCGCATGAGGGTGTCATCGGGGAA
GCGGAGGCCAAGCAGGAGTCCGAGCAGGCGCAGGCCAACGCGAACCGCTTCATCGAGCGGCGGGCGCCTGTACTGCTCCA
GGAATGGGGCATCCATTAG

Upstream 100 bases:

>100_bases
GCGCCAGCTCCGCCATTTACAGATCACTGGTGCACCGGGCCTGAAAACGCTGCCGCCCTCGTTGACGCGCCTATCCAATC
TGACAACCCTTCAATTGACG

Downstream 100 bases:

>100_bases
ACCCTGGCGCCCGGCGATGCCACTCCCGCAGTTGAATGGACAGGCATGCTGATGATGTTGATCGCAGAACCCGGCGGGTG
TTTGCCCGCCGCGTCCATGC

Product: HpaG LRR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVPLDELPADLGRMQGLRNLSLGGGHYARLPARIVELSRLSELRMSHSSHFRQLPENIGLMQGLRSLEVASNSKLEQLPG
SLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSCTALQQLPDSVGDLAQLQLLDLRDTGLQTLPQSLARLPAQC
DIKVPDHLADRLLQIRDPERAQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRSVDADLGERFEKWTQGLM
QNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGPAVRGDAKTAFAEMLKHKLMH
TQDHETALGLLLEALRNSDLGLSRQTLLRSRNELTGRVEMWPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGE
AEAKQESEQAQANANRFIERRAPVLLQEWGIH

Sequences:

>Translated_432_residues
MVPLDELPADLGRMQGLRNLSLGGGHYARLPARIVELSRLSELRMSHSSHFRQLPENIGLMQGLRSLEVASNSKLEQLPG
SLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSCTALQQLPDSVGDLAQLQLLDLRDTGLQTLPQSLARLPAQC
DIKVPDHLADRLLQIRDPERAQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRSVDADLGERFEKWTQGLM
QNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGPAVRGDAKTAFAEMLKHKLMH
TQDHETALGLLLEALRNSDLGLSRQTLLRSRNELTGRVEMWPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGE
AEAKQESEQAQANANRFIERRAPVLLQEWGIH
>Mature_432_residues
MVPLDELPADLGRMQGLRNLSLGGGHYARLPARIVELSRLSELRMSHSSHFRQLPENIGLMQGLRSLEVASNSKLEQLPG
SLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSCTALQQLPDSVGDLAQLQLLDLRDTGLQTLPQSLARLPAQC
DIKVPDHLADRLLQIRDPERAQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRSVDADLGERFEKWTQGLM
QNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGPAVRGDAKTAFAEMLKHKLMH
TQDHETALGLLLEALRNSDLGLSRQTLLRSRNELTGRVEMWPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGE
AEAKQESEQAQANANRFIERRAPVLLQEWGIH

Specific function: Probably involved in host-pathogen interactions. May interact with plant target proteins; may modulate a plant signal transduction pathway [H]

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 22 LRR (leucine-rich) repeats [H]

Homologues:

Organism=Homo sapiens, GI95113664, Length=167, Percent_Identity=36.5269461077844, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI16904383, Length=153, Percent_Identity=38.562091503268, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI61742784, Length=154, Percent_Identity=40.2597402597403, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI61742786, Length=154, Percent_Identity=40.2597402597403, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI110825984, Length=143, Percent_Identity=40.5594405594406, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI122937315, Length=153, Percent_Identity=32.0261437908497, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI256017180, Length=136, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI256017174, Length=165, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI33859670, Length=136, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI8923909, Length=153, Percent_Identity=32.0261437908497, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI14249428, Length=130, Percent_Identity=35.3846153846154, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI55770895, Length=153, Percent_Identity=32.0261437908497, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI41281398, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71991531, Length=159, Percent_Identity=34.5911949685535, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71991525, Length=159, Percent_Identity=34.5911949685535, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281362651, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007092, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650334, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650332, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362653, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650330, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362655, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362657, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650336, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI62472958, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI19922294, Length=117, Percent_Identity=41.025641025641, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 48136; Mature: 48136

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLDELPADLGRMQGLRNLSLGGGHYARLPARIVELSRLSELRMSHSSHFRQLPENIGL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQGLRSLEVASNSKLEQLPGSLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSC
HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
TALQQLPDSVGDLAQLQLLDLRDTGLQTLPQSLARLPAQCDIKVPDHLADRLLQIRDPER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHH
AQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRSVDADLGERFEKWTQGLM
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGP
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHCCCCCC
AVRGDAKTAFAEMLKHKLMHTQDHETALGLLLEALRNSDLGLSRQTLLRSRNELTGRVEM
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEC
WPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGEAEAKQESEQAQANANRFIER
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RAPVLLQEWGIH
HCCHHHHHCCCC
>Mature Secondary Structure
MVPLDELPADLGRMQGLRNLSLGGGHYARLPARIVELSRLSELRMSHSSHFRQLPENIGL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQGLRSLEVASNSKLEQLPGSLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSC
HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
TALQQLPDSVGDLAQLQLLDLRDTGLQTLPQSLARLPAQCDIKVPDHLADRLLQIRDPER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHH
AQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRSVDADLGERFEKWTQGLM
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGP
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHCCCCCC
AVRGDAKTAFAEMLKHKLMHTQDHETALGLLLEALRNSDLGLSRQTLLRSRNELTGRVEM
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEC
WPPLKAYISMHDVEGKAAQDAAITWAMAQLDEAHEGVIGEAEAKQESEQAQANANRFIER
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RAPVLLQEWGIH
HCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10792715; 11823852 [H]