| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045909
Identifier: 78045909
GI number: 78045909
Start: 404289
End: 404804
Strand: Reverse
Name: 78045909
Synonym: XCV0353
Alternate gene names: NA
Gene position: 404804-404289 (Counterclockwise)
Preceding gene: 78045910
Following gene: 78045908
Centisome position: 7.82
GC content: 57.17
Gene sequence:
>516_bases GTGCATTTAGACAGAAAGCAACGAGGCGTGGTCCTCGGCATGGCATCTGGCCTTTTTGCTTCTCTACTCGTTGTGTTCCT ACTATCACGAGCGTTCTTGCGCTGGGACACACCAGAGCGGACAGTTATCAGCTTGCTGTTGCCGGCCGCGGCGATGTTTG TCGCTATCGCACGCATGGCCAAACACCGATTCGTTACGCCTGCAGACATTGACGGCAGCGCGATGGGTGATGGGACCGTT CGTGCTAAAACGTTGCAATCTTTGCTTCAAAATACGACAGAGCAGCTAGCGTTTGCGCTGCCGGTCTACGTCGCCGCCCT CATGAACCCGCACCGCGGCATCCAAGCCGCAGTTCCGGCATGCGCTTGTGCGTTCTTGCTTGGAAGGCTGACGTTTTTTG CGACCTACAGTGGCGGTGCTGGCGCCAGAGCGCTGGGGTTCGCACTGACCTTCTATCCCACTGTGCTCCTGCTCATCTGG CAACTCGTGCTGCTTGCAGTTAGTGTTGCCGGCTAA
Upstream 100 bases:
>100_bases CCCGGAAATCGCGGAAGAAATGACCTACCGCTTGAGGCGCATCAATGCCTGAAACCTACGCCAAGGTGTCCTCGAACGTT CGCCGGCAGAGGGAGCCACG
Downstream 100 bases:
>100_bases CAATTCATTGAGGTATTGGGCCGCATGCAGACGTTTCTAGAACCTGTCGGCTCCGAGGTCCAATGGCATGAAGGCGCAGA CGTTAGCGAGATCATCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MHLDRKQRGVVLGMASGLFASLLVVFLLSRAFLRWDTPERTVISLLLPAAAMFVAIARMAKHRFVTPADIDGSAMGDGTV RAKTLQSLLQNTTEQLAFALPVYVAALMNPHRGIQAAVPACACAFLLGRLTFFATYSGGAGARALGFALTFYPTVLLLIW QLVLLAVSVAG
Sequences:
>Translated_171_residues MHLDRKQRGVVLGMASGLFASLLVVFLLSRAFLRWDTPERTVISLLLPAAAMFVAIARMAKHRFVTPADIDGSAMGDGTV RAKTLQSLLQNTTEQLAFALPVYVAALMNPHRGIQAAVPACACAFLLGRLTFFATYSGGAGARALGFALTFYPTVLLLIW QLVLLAVSVAG >Mature_171_residues MHLDRKQRGVVLGMASGLFASLLVVFLLSRAFLRWDTPERTVISLLLPAAAMFVAIARMAKHRFVTPADIDGSAMGDGTV RAKTLQSLLQNTTEQLAFALPVYVAALMNPHRGIQAAVPACACAFLLGRLTFFATYSGGAGARALGFALTFYPTVLLLIW QLVLLAVSVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18279; Mature: 18279
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDRKQRGVVLGMASGLFASLLVVFLLSRAFLRWDTPERTVISLLLPAAAMFVAIARMA CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KHRFVTPADIDGSAMGDGTVRAKTLQSLLQNTTEQLAFALPVYVAALMNPHRGIQAAVPA HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CACAFLLGRLTFFATYSGGAGARALGFALTFYPTVLLLIWQLVLLAVSVAG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLDRKQRGVVLGMASGLFASLLVVFLLSRAFLRWDTPERTVISLLLPAAAMFVAIARMA CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KHRFVTPADIDGSAMGDGTVRAKTLQSLLQNTTEQLAFALPVYVAALMNPHRGIQAAVPA HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CACAFLLGRLTFFATYSGGAGARALGFALTFYPTVLLLIWQLVLLAVSVAG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA