| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045896
Identifier: 78045896
GI number: 78045896
Start: 392160
End: 393137
Strand: Reverse
Name: 78045896
Synonym: XCV0340
Alternate gene names: NA
Gene position: 393137-392160 (Counterclockwise)
Preceding gene: 78045897
Following gene: 78045895
Centisome position: 7.59
GC content: 64.21
Gene sequence:
>978_bases GTGGATTTTGGCTCCTTTCCGCTGGATCAGTGCGTCGTGGCGATGCCACCCGATCATCATGACAAGACGGCAAGACCCGT GATTTCTACCGACACGCCGAACTTCGCGAGCACCGTGACCGAGGCCTATTCGCTGGAGGTCAGCGCCAAGGACATCGGCG CGCTGACCAATGCGGCCCCACGCATCCTGCCTGGCTGCGCCATGTTCATTCCCTACCTGCCAGGCCAAAACCAGGCGGTG CGGCTGGCCGCAGCACAGATGGTGCGTAGCCTTGGTTTCGAACCTGTGCCCCATCTTTCCGCGCGTCGCATCGGCTCGCT CGGGGAACTGCAGGCATGTATCGCGCGCCTGGTCGATGAGGCCGGCGTCACACGCTGCCTGGTGATTGCGGGCGATCCCT CCACCCCGAAGGGACCGTTTCCCGACAGCGTGTCGCTGATCGAGACGGGTGTGTTTGAACGCTCAGGCATCCGCACCATC GCCGTGGCGGGTCACCCGGAGGGGCATCCGATCCTGCGCACGACAGAACAATGGGAAGTGCTGGAACGCAAGTGTCGCAG CATCCAGGAGCGTGGCATGGCGCCCCTGATCGTGACGCAGTTCGGGTTCGACGCCGACATCGTGGTGACATGGCTGGAAG CGTTGCGCGCGCGTGGCATGACGCATCCGGTGCGGGTGGGCGTGCCTGGTCCTGCCAGTGTCGCCGTTCTCGCACGCTAT GCGGCAAGCTGCGGTGTCGGCGCCTGCGCGTCGGTGCTCTCAAACTATGGCATCTCCATTGGCAAGTTATTCGGCAACGC GGGGCCGGATCGCTTTGTCGATCGCCTCGCCAGCCGCCTGACAGAAGCCCATGGAGATGTCCGCCTGCACCTGTTTCCGT TCGGCGGCATCGCCCAGTCTGTGGAGTGGGTTGCGCACTATCGCTCGCGTGCTTCGCAGCAAGATCGCATGCGTTCCGTG CGCGCCGATCAGGCCTGA
Upstream 100 bases:
>100_bases GTGTGGACAGCGGCCGCAAGCGCATTCAACTCGGTGTGAAGTTCTACGGCGATGACGCGCCGGAAGACTGAGCCTTTCGC CAGTTTAGCGGAGACCCCAT
Downstream 100 bases:
>100_bases CAGCAACCTGTCCGTGTGCCAATCGGCGCGGGCTTGAGACGGTCACACTGCTGCTGATCTGGCTATCCGGCCGTGGCAAG GCCGACGAGGATGAGAACAG
Product: putative 5,10-methylenetetrahydrofolate reductase
Products: NA
Alternate protein names: 5 10-Methylenetetrahydrofolate Reductase; Methylenetetrahydrofolate Reductase Family Protein; Metfprotein-Like; MetF-Like Protein; Metfprotein -Like Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MDFGSFPLDQCVVAMPPDHHDKTARPVISTDTPNFASTVTEAYSLEVSAKDIGALTNAAPRILPGCAMFIPYLPGQNQAV RLAAAQMVRSLGFEPVPHLSARRIGSLGELQACIARLVDEAGVTRCLVIAGDPSTPKGPFPDSVSLIETGVFERSGIRTI AVAGHPEGHPILRTTEQWEVLERKCRSIQERGMAPLIVTQFGFDADIVVTWLEALRARGMTHPVRVGVPGPASVAVLARY AASCGVGACASVLSNYGISIGKLFGNAGPDRFVDRLASRLTEAHGDVRLHLFPFGGIAQSVEWVAHYRSRASQQDRMRSV RADQA
Sequences:
>Translated_325_residues MDFGSFPLDQCVVAMPPDHHDKTARPVISTDTPNFASTVTEAYSLEVSAKDIGALTNAAPRILPGCAMFIPYLPGQNQAV RLAAAQMVRSLGFEPVPHLSARRIGSLGELQACIARLVDEAGVTRCLVIAGDPSTPKGPFPDSVSLIETGVFERSGIRTI AVAGHPEGHPILRTTEQWEVLERKCRSIQERGMAPLIVTQFGFDADIVVTWLEALRARGMTHPVRVGVPGPASVAVLARY AASCGVGACASVLSNYGISIGKLFGNAGPDRFVDRLASRLTEAHGDVRLHLFPFGGIAQSVEWVAHYRSRASQQDRMRSV RADQA >Mature_325_residues MDFGSFPLDQCVVAMPPDHHDKTARPVISTDTPNFASTVTEAYSLEVSAKDIGALTNAAPRILPGCAMFIPYLPGQNQAV RLAAAQMVRSLGFEPVPHLSARRIGSLGELQACIARLVDEAGVTRCLVIAGDPSTPKGPFPDSVSLIETGVFERSGIRTI AVAGHPEGHPILRTTEQWEVLERKCRSIQERGMAPLIVTQFGFDADIVVTWLEALRARGMTHPVRVGVPGPASVAVLARY AASCGVGACASVLSNYGISIGKLFGNAGPDRFVDRLASRLTEAHGDVRLHLFPFGGIAQSVEWVAHYRSRASQQDRMRSV RADQA
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34875; Mature: 34875
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGSFPLDQCVVAMPPDHHDKTARPVISTDTPNFASTVTEAYSLEVSAKDIGALTNAAP CCCCCCCHHHCEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHEEECHHHHHHHHCCCH RILPGCAMFIPYLPGQNQAVRLAAAQMVRSLGFEPVPHLSARRIGSLGELQACIARLVDE HHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH AGVTRCLVIAGDPSTPKGPFPDSVSLIETGVFERSGIRTIAVAGHPEGHPILRTTEQWEV CCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCHHHHH LERKCRSIQERGMAPLIVTQFGFDADIVVTWLEALRARGMTHPVRVGVPGPASVAVLARY HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHH AASCGVGACASVLSNYGISIGKLFGNAGPDRFVDRLASRLTEAHGDVRLHLFPFGGIAQS HHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH VEWVAHYRSRASQQDRMRSVRADQA HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDFGSFPLDQCVVAMPPDHHDKTARPVISTDTPNFASTVTEAYSLEVSAKDIGALTNAAP CCCCCCCHHHCEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHEEECHHHHHHHHCCCH RILPGCAMFIPYLPGQNQAVRLAAAQMVRSLGFEPVPHLSARRIGSLGELQACIARLVDE HHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH AGVTRCLVIAGDPSTPKGPFPDSVSLIETGVFERSGIRTIAVAGHPEGHPILRTTEQWEV CCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCHHHHH LERKCRSIQERGMAPLIVTQFGFDADIVVTWLEALRARGMTHPVRVGVPGPASVAVLARY HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHH AASCGVGACASVLSNYGISIGKLFGNAGPDRFVDRLASRLTEAHGDVRLHLFPFGGIAQS HHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH VEWVAHYRSRASQQDRMRSVRADQA HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA