| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is baeS [H]
Identifier: 78045891
GI number: 78045891
Start: 382247
End: 383626
Strand: Reverse
Name: baeS [H]
Synonym: XCV0335
Alternate gene names: 78045891
Gene position: 383626-382247 (Counterclockwise)
Preceding gene: 78045895
Following gene: 78045890
Centisome position: 7.41
GC content: 69.86
Gene sequence:
>1380_bases ATGAAACTGGGTATCACCGCCAAGCTGTTTCTCGCCATCCTCGCCGCGTGCGTGGCAGTGCTGCTGATCAACGGCATCGC GGTGCAGGCCTTCGTCAAACGCCAGTTCCTGGACTACCTCAACGAACAGGGCGTGGAGCGCATGCAAGAGACCTTGCCGC GGGTCAGGGCCGAATACGCGCGGCACGGCAGCTGGGAGTTCGTGCGCGACAATCCCGATGCCTGGTTCGTCCTGATGCGC CCGGAGCGTGGCCCCGGCCCGCCGCGCGAGGCACCGCCGATTTCCGACCAGACCGGCGCGGTGTTTCGCTTCGCGCTGCT CGACCAGGACTACACGCCGGTGATTGGCAATCCGGATGTCGGCCGCCACGACATCCTGCGCCCGGTGGTGGTTGGCGGCC GCACCGTCGGCTGGATGGCGATGCTGCCGTTCCAGAAGGCGCTGGCAGCGGCGGACGCGCGCTTCTACGCCGCCCAGCAA CGCGCGTGGTGGGCGATCGGCGGCGCCTGCCTGCTGGTCGCCGCGCTGCTCGGCTGGCTGTTGTCGCGCACCTTGCTGCG GCGCCTGCGTGGCCTGACCCAGGCCACCCACCTGCTCGCTGCGGGCGACTACGCCACCCGCATCGACGCCGCGGCGCGCG ACGAACTGGGCCAGCTGGCGCGCGATTTCAACCTGCTGGCGCAAGCGTTGGAGCACAACGAACGCGCGCGGCGCGACTTC ATGGCCGACATCTCGCACGAGCTGCGCACGCCGCTGGCGGTCCTGCGCGCCGAACTGGAAGCACTGCAGGACGGCATCCG GCCGATGACACCCATCTCGCTGGGGTCGCTGCACCAGCAGGTCGGCCAGTTGGGCAAGCTGATCGAGGACCTGTACGACG TGTCGCTGACCGATGTCGGTGCGCTGGCGTATCGGCGCGCTCCCGTCGATCTGGCGGTCATCCTGGCAACCGTGCTGGAC GGCTTGCACGCGCGCTTTGCCGCCGCGCAGCTGCAGGTGCAGGCGCAGATCGATGCCGGCCCGCTGCAGCTGGACGGCGA CGAGCGCCGTCTGCAGCAACTGCTGGGCAACCTGCTGGAAAACACGCTGCGCTACACCGACGCCGGTGGCACGGTGCAGG TGCGCTGCGTGCGCCGCGGCGCGGTGCTGGAGCTGGTGGTCGAAGACAGCGCGCCAGGCGTGGATGCAGACAAGCGCGCG CGGTTGTTCGAACGCTTCTACCGCACCGAGGCCTCACGCAATCGTGCCAGCGGCGGCGGCGGCCTGGGCCTGGCGATCTG CCGCAACATCGCCGAGGCACACGGCGGCTCGATCCACGCCGAGGCTTCCGCACTGGGCGGGCTGCGCATGGTGCTGCGCT TGCCGGCGCTGGCCGCATGA
Upstream 100 bases:
>100_bases TGGAGATTGCCGGCCGCGGCGTCGATTCGCTTGATTTCCCCTGGCCCGACCCGGCTAATACGCAGCAGCTGCGGTTACCG CGCTTCGCATCACCTCTTCG
Downstream 100 bases:
>100_bases GCAGCGCGTCCCCGATCGGGCATGTGCTGATCGTCGAGGACGAACCGCGCCTGGCCGCGGTGTTGGGCGAGTACCTGCAC GCGGCCGGCTATTCGCACGA
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKLGITAKLFLAILAACVAVLLINGIAVQAFVKRQFLDYLNEQGVERMQETLPRVRAEYARHGSWEFVRDNPDAWFVLMR PERGPGPPREAPPISDQTGAVFRFALLDQDYTPVIGNPDVGRHDILRPVVVGGRTVGWMAMLPFQKALAAADARFYAAQQ RAWWAIGGACLLVAALLGWLLSRTLLRRLRGLTQATHLLAAGDYATRIDAAARDELGQLARDFNLLAQALEHNERARRDF MADISHELRTPLAVLRAELEALQDGIRPMTPISLGSLHQQVGQLGKLIEDLYDVSLTDVGALAYRRAPVDLAVILATVLD GLHARFAAAQLQVQAQIDAGPLQLDGDERRLQQLLGNLLENTLRYTDAGGTVQVRCVRRGAVLELVVEDSAPGVDADKRA RLFERFYRTEASRNRASGGGGLGLAICRNIAEAHGGSIHAEASALGGLRMVLRLPALAA
Sequences:
>Translated_459_residues MKLGITAKLFLAILAACVAVLLINGIAVQAFVKRQFLDYLNEQGVERMQETLPRVRAEYARHGSWEFVRDNPDAWFVLMR PERGPGPPREAPPISDQTGAVFRFALLDQDYTPVIGNPDVGRHDILRPVVVGGRTVGWMAMLPFQKALAAADARFYAAQQ RAWWAIGGACLLVAALLGWLLSRTLLRRLRGLTQATHLLAAGDYATRIDAAARDELGQLARDFNLLAQALEHNERARRDF MADISHELRTPLAVLRAELEALQDGIRPMTPISLGSLHQQVGQLGKLIEDLYDVSLTDVGALAYRRAPVDLAVILATVLD GLHARFAAAQLQVQAQIDAGPLQLDGDERRLQQLLGNLLENTLRYTDAGGTVQVRCVRRGAVLELVVEDSAPGVDADKRA RLFERFYRTEASRNRASGGGGLGLAICRNIAEAHGGSIHAEASALGGLRMVLRLPALAA >Mature_459_residues MKLGITAKLFLAILAACVAVLLINGIAVQAFVKRQFLDYLNEQGVERMQETLPRVRAEYARHGSWEFVRDNPDAWFVLMR PERGPGPPREAPPISDQTGAVFRFALLDQDYTPVIGNPDVGRHDILRPVVVGGRTVGWMAMLPFQKALAAADARFYAAQQ RAWWAIGGACLLVAALLGWLLSRTLLRRLRGLTQATHLLAAGDYATRIDAAARDELGQLARDFNLLAQALEHNERARRDF MADISHELRTPLAVLRAELEALQDGIRPMTPISLGSLHQQVGQLGKLIEDLYDVSLTDVGALAYRRAPVDLAVILATVLD GLHARFAAAQLQVQAQIDAGPLQLDGDERRLQQLLGNLLENTLRYTDAGGTVQVRCVRRGAVLELVVEDSAPGVDADKRA RLFERFYRTEASRNRASGGGGLGLAICRNIAEAHGGSIHAEASALGGLRMVLRLPALAA
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=463, Percent_Identity=45.5723542116631, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1786783, Length=271, Percent_Identity=30.9963099630996, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1786600, Length=253, Percent_Identity=30.4347826086957, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1787894, Length=254, Percent_Identity=31.496062992126, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790346, Length=235, Percent_Identity=34.0425531914894, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=29.0196078431373, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1789149, Length=317, Percent_Identity=25.5520504731861, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=30.4166666666667, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI87081816, Length=237, Percent_Identity=32.0675105485232, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787374, Length=293, Percent_Identity=27.9863481228669, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788279, Length=270, Percent_Identity=25.1851851851852, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789808, Length=289, Percent_Identity=26.2975778546713, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=29.0598290598291, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=274, Percent_Identity=26.2773722627737, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=26.431718061674, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1790861, Length=361, Percent_Identity=25.7617728531856, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789403, Length=216, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790551, Length=209, Percent_Identity=32.5358851674641, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=26.2295081967213, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=24.6575342465753, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50109; Mature: 50109
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGITAKLFLAILAACVAVLLINGIAVQAFVKRQFLDYLNEQGVERMQETLPRVRAEYA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGSWEFVRDNPDAWFVLMRPERGPGPPREAPPISDQTGAVFRFALLDQDYTPVIGNPDV HCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC GRHDILRPVVVGGRTVGWMAMLPFQKALAAADARFYAAQQRAWWAIGGACLLVAALLGWL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRTLLRRLRGLTQATHLLAAGDYATRIDAAARDELGQLARDFNLLAQALEHNERARRDF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MADISHELRTPLAVLRAELEALQDGIRPMTPISLGSLHQQVGQLGKLIEDLYDVSLTDVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH ALAYRRAPVDLAVILATVLDGLHARFAAAQLQVQAQIDAGPLQLDGDERRLQQLLGNLLE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHHHHH NTLRYTDAGGTVQVRCVRRGAVLELVVEDSAPGVDADKRARLFERFYRTEASRNRASGGG HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GLGLAICRNIAEAHGGSIHAEASALGGLRMVLRLPALAA CHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLGITAKLFLAILAACVAVLLINGIAVQAFVKRQFLDYLNEQGVERMQETLPRVRAEYA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGSWEFVRDNPDAWFVLMRPERGPGPPREAPPISDQTGAVFRFALLDQDYTPVIGNPDV HCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC GRHDILRPVVVGGRTVGWMAMLPFQKALAAADARFYAAQQRAWWAIGGACLLVAALLGWL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRTLLRRLRGLTQATHLLAAGDYATRIDAAARDELGQLARDFNLLAQALEHNERARRDF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MADISHELRTPLAVLRAELEALQDGIRPMTPISLGSLHQQVGQLGKLIEDLYDVSLTDVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH ALAYRRAPVDLAVILATVLDGLHARFAAAQLQVQAQIDAGPLQLDGDERRLQQLLGNLLE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHHHHHHH NTLRYTDAGGTVQVRCVRRGAVLELVVEDSAPGVDADKRARLFERFYRTEASRNRASGGG HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GLGLAICRNIAEAHGGSIHAEASALGGLRMVLRLPALAA CHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]