Click here to switch to the map view.

The map label for this gene is 78045869

Identifier: 78045869

GI number: 78045869

Start: 357591

End: 358049

Strand: Reverse

Name: 78045869

Synonym: XCV0313

Alternate gene names: NA

Gene position: 358049-357591 (Counterclockwise)

Preceding gene: 78045870

Following gene: 78045867

Centisome position: 6.91

GC content: 60.13

Gene sequence:

>459_bases
ATGACAGACCAAGATCAACATCAACCGTCGCTGGAAGACGTCAAGCTGGCGTTCGATGGCCAGAGCGTGGATTGGTATCT
GCAGAAGCTGGTCGGCATTGCCAACACCTCGGACGTGCAGTTCGGCGTCACGCTGTTTGTCGAAGGCATCGTCATTTCCG
GCCAGTTGGTCAGCGGCAAGCGGTATTTCGAGGCATTTGCGCAGGAGTTCTCTGCGGCCTACCCCGGCGCGGCCGATGAA
AAAGAAGATATCCGTCGCGCGTTTGCCAGCCACGCCAGCATCTACGATTCCGAAGACGATGCGCAGCAGAGCAGCACGCC
GCCGCAGTTCATCCACCTGATCGATGCGCGTTGCTTCTCACCGGGCGGCCAGCCGCTGCCAAGCAACCGTGGCGTGTTGT
GGCGTGGCAAGGTCAATGCGGTTTCCGGCTTCACCCTTGGGTCGCTGTCGGCAGACTGA

Upstream 100 bases:

>100_bases
ACCTTGGCGATCCGTGTGCCATGCTTAGGCACGCCAACGGCGCGCCATCCACATCTGCGTTACGGCTAACGCGTCGTCCA
ATCCACTCAAGGAGAGCAAC

Downstream 100 bases:

>100_bases
GCGCGGCCAACAACACGTCGCGCGCCGCCGTCAGGTGGGCGCGGACGGCGCGCTCAGAACCGCAGTGTACGTGTGGTACA
TGCCGATTCCGGGCACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Gas Vesicle Protein U

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTDQDQHQPSLEDVKLAFDGQSVDWYLQKLVGIANTSDVQFGVTLFVEGIVISGQLVSGKRYFEAFAQEFSAAYPGAADE
KEDIRRAFASHASIYDSEDDAQQSSTPPQFIHLIDARCFSPGGQPLPSNRGVLWRGKVNAVSGFTLGSLSAD

Sequences:

>Translated_152_residues
MTDQDQHQPSLEDVKLAFDGQSVDWYLQKLVGIANTSDVQFGVTLFVEGIVISGQLVSGKRYFEAFAQEFSAAYPGAADE
KEDIRRAFASHASIYDSEDDAQQSSTPPQFIHLIDARCFSPGGQPLPSNRGVLWRGKVNAVSGFTLGSLSAD
>Mature_151_residues
TDQDQHQPSLEDVKLAFDGQSVDWYLQKLVGIANTSDVQFGVTLFVEGIVISGQLVSGKRYFEAFAQEFSAAYPGAADEK
EDIRRAFASHASIYDSEDDAQQSSTPPQFIHLIDARCFSPGGQPLPSNRGVLWRGKVNAVSGFTLGSLSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16532; Mature: 16401

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQDQHQPSLEDVKLAFDGQSVDWYLQKLVGIANTSDVQFGVTLFVEGIVISGQLVSGK
CCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEECEEECCH
RYFEAFAQEFSAAYPGAADEKEDIRRAFASHASIYDSEDDAQQSSTPPQFIHLIDARCFS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCC
PGGQPLPSNRGVLWRGKVNAVSGFTLGSLSAD
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDQDQHQPSLEDVKLAFDGQSVDWYLQKLVGIANTSDVQFGVTLFVEGIVISGQLVSGK
CCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEECEEECCH
RYFEAFAQEFSAAYPGAADEKEDIRRAFASHASIYDSEDDAQQSSTPPQFIHLIDARCFS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCC
PGGQPLPSNRGVLWRGKVNAVSGFTLGSLSAD
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA