| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045862
Identifier: 78045862
GI number: 78045862
Start: 350771
End: 351187
Strand: Reverse
Name: 78045862
Synonym: XCV0306
Alternate gene names: NA
Gene position: 351187-350771 (Counterclockwise)
Preceding gene: 78045863
Following gene: 78045861
Centisome position: 6.78
GC content: 64.75
Gene sequence:
>417_bases TTGGCTGCAGGTGCACCCGGCATGAGCATTGCCGCCTCCCGGATCGATCTGCCCGAGGTGATCGCGCAAGTGACGGCCGC CTTCCATGCCTACGAAACCGCGCTGATGCGCGACGACATCGCGGCGATGGATGCGCTGTTTCATGCAGCGCCCAGCACGG TGCGCTATGGCGTGGGCGAAGTGTTGTACGGCATCGATGCGATCCGCGCATTTCGCAGCGGCCGCGGTGGTTCGCCGCAA CGCCAGCTCGCACATGTGCAGGTACACGGCTTCGGGCATGACTTTGCCACTACGCACGCAGAGTTCATTCGCGAGGGCAG CAGCGCACGCGGGCGGCAAAGCCAGAGCTGGGTGCGCTTTGCCGACGGCTGGAAAGTGGTGGCTGCGCATGTCTCGTTGC AAGGCACGCACGCATGA
Upstream 100 bases:
>100_bases TGGGCAAGCCGGCACGCGCGGCGGCGCTGGCGCGCTTTGTCGATCATGTACTGGCCAGCGGCGATGCCTGGATTGCGCGC CGCATCGATATTGCGCGCCA
Downstream 100 bases:
>100_bases GCGTGGTCGACGACCCCGCGCTGGACGATGCCGCCTTCCTGGCGCGCTACCGCGACCTGTTCGAGCACTCGCCGTGGGTG GTTGAACGTGCGCTGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAAGAPGMSIAASRIDLPEVIAQVTAAFHAYETALMRDDIAAMDALFHAAPSTVRYGVGEVLYGIDAIRAFRSGRGGSPQ RQLAHVQVHGFGHDFATTHAEFIREGSSARGRQSQSWVRFADGWKVVAAHVSLQGTHA
Sequences:
>Translated_138_residues MAAGAPGMSIAASRIDLPEVIAQVTAAFHAYETALMRDDIAAMDALFHAAPSTVRYGVGEVLYGIDAIRAFRSGRGGSPQ RQLAHVQVHGFGHDFATTHAEFIREGSSARGRQSQSWVRFADGWKVVAAHVSLQGTHA >Mature_137_residues AAGAPGMSIAASRIDLPEVIAQVTAAFHAYETALMRDDIAAMDALFHAAPSTVRYGVGEVLYGIDAIRAFRSGRGGSPQR QLAHVQVHGFGHDFATTHAEFIREGSSARGRQSQSWVRFADGWKVVAAHVSLQGTHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14730; Mature: 14598
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGAPGMSIAASRIDLPEVIAQVTAAFHAYETALMRDDIAAMDALFHAAPSTVRYGVGE CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLYGIDAIRAFRSGRGGSPQRQLAHVQVHGFGHDFATTHAEFIREGSSARGRQSQSWVRF HHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ADGWKVVAAHVSLQGTHA CCCCEEEEEEEEECCCCC >Mature Secondary Structure AAGAPGMSIAASRIDLPEVIAQVTAAFHAYETALMRDDIAAMDALFHAAPSTVRYGVGE CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLYGIDAIRAFRSGRGGSPQRQLAHVQVHGFGHDFATTHAEFIREGSSARGRQSQSWVRF HHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ADGWKVVAAHVSLQGTHA CCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA