Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78045855

Identifier: 78045855

GI number: 78045855

Start: 343803

End: 344234

Strand: Reverse

Name: 78045855

Synonym: XCV0299

Alternate gene names: NA

Gene position: 344234-343803 (Counterclockwise)

Preceding gene: 78045856

Following gene: 78045852

Centisome position: 6.65

GC content: 68.52

Gene sequence:

>432_bases
ATGAGCAAGCTGACTGTGATCACCGAACGCGCCCTGGAGCGTGCCCTGGAACTGGCCGGCACTGCGGGCGACCAGCTGCG
TCATGCCGCGTCCAACGCGGGCGACCAGGCACGCCACGCCGGCAGCAGCCTGCGTCATTTCGGACCGAGCGCAAGCGAAT
GGCTCAAGACCGGCGCCGCGCTCGGCGCAGTGCGCACCGGTGGCAAGGCCGCCAGCAAACTGGTCAAGCGCAACCCGGCC
GTGACGGTTGCCGCCGCGGTCGCAGGCCTGGGCCTGATCGGCTATGCGGTGTACCGCAAGCGTCAGCGTGACCAGCAGGT
GCTCGGCGGCAATGTGCATCGTCTGGATCGCGAACATGCCAGCAATGCCAACGCACGCCGTGCGGCCTACCAGCGCCGCG
GTGCAGTGACCCCGAGCGACGGCATCGAATAA

Upstream 100 bases:

>100_bases
TACCTAACCGTAAGCCAAACGGCACCCGGTCCCGCTAACGCCGCCTATACGCATCAGCGCACAGACTGCAGATCACGTAC
TCAGAAAGGAAACGCCTCCG

Downstream 100 bases:

>100_bases
GCCATCGCGCGAAGTCATGCATAAACGCCACGGCCTGATGCCGTGGCGTTTTTCGTTTGTGGCATGCATGTCTGCGTGCA
GCGCAATGCACCGATGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSKLTVITERALERALELAGTAGDQLRHAASNAGDQARHAGSSLRHFGPSASEWLKTGAALGAVRTGGKAASKLVKRNPA
VTVAAAVAGLGLIGYAVYRKRQRDQQVLGGNVHRLDREHASNANARRAAYQRRGAVTPSDGIE

Sequences:

>Translated_143_residues
MSKLTVITERALERALELAGTAGDQLRHAASNAGDQARHAGSSLRHFGPSASEWLKTGAALGAVRTGGKAASKLVKRNPA
VTVAAAVAGLGLIGYAVYRKRQRDQQVLGGNVHRLDREHASNANARRAAYQRRGAVTPSDGIE
>Mature_142_residues
SKLTVITERALERALELAGTAGDQLRHAASNAGDQARHAGSSLRHFGPSASEWLKTGAALGAVRTGGKAASKLVKRNPAV
TVAAAVAGLGLIGYAVYRKRQRDQQVLGGNVHRLDREHASNANARRAAYQRRGAVTPSDGIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15032; Mature: 14901

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTVITERALERALELAGTAGDQLRHAASNAGDQARHAGSSLRHFGPSASEWLKTGAA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGAVRTGGKAASKLVKRNPAVTVAAAVAGLGLIGYAVYRKRQRDQQVLGGNVHRLDREHA
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SNANARRAAYQRRGAVTPSDGIE
CCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKLTVITERALERALELAGTAGDQLRHAASNAGDQARHAGSSLRHFGPSASEWLKTGAA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGAVRTGGKAASKLVKRNPAVTVAAAVAGLGLIGYAVYRKRQRDQQVLGGNVHRLDREHA
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SNANARRAAYQRRGAVTPSDGIE
CCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA