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The map label for this gene is 78045842

Identifier: 78045842

GI number: 78045842

Start: 332051

End: 332926

Strand: Reverse

Name: 78045842

Synonym: XCV0286

Alternate gene names: NA

Gene position: 332926-332051 (Counterclockwise)

Preceding gene: 78045848

Following gene: 78045841

Centisome position: 6.43

GC content: 64.61

Gene sequence:

>876_bases
ATGCATTTTCTGCTGTTTGCCGTTGTCTGCAGTGTCCTGGTGTCGGTGCTGTTGAAGCTTGCGCCACGCCACCGGATCGA
CGTGTTTCAGGCCATTACCTGGAACTACGCCACCGCTGCACTCCTGGCCTGGCTGATCCTGCATCCGGCGCTGGACACGC
TACGCGCCACGACTACTCCCTGGTTGGCGTTGCTGCTGTTGGCCGTGGCGCTGCCCTCCATCTTCCTGGTGTTGGCGCGG
TCGGTCGCGGTGGCCGGCGTCGTGCGCACCGATGTCGCGCAACGCTTGTCGTTGGTGCTCTCGTTGGCCGCCGCCTTCAC
CGTTTTCGGCGAACCGGTCAATGGCTGGAAACTGGCAGGGCTTGCGCTGGGCATGGTGGCCATCGTGTGCATCGTGCGAC
GCCCCCGTCAGCACCTAGCGACCGATCCGCTGCCGAGCACAACCGGCCTGCCCTGGCTGATTGGCGTCTGGATGGGCTTT
GCGCTCATCGACCTGCTGCTCAAGCACATTGCGCAGGCCGGGACACCATCGCTGACCTCGTTGACCTTGTGCTTTGCGCT
GGCCTTCTTGCTGATGCTTGGCGTGCAGGGCGTGCGTTGGGCACGTGGCGCACGCCTGAGCACCCGCAGCATGCTTGCCG
GCGTGCTGTTGGGTGCGCTCAATTTCGGCAACATCCTGTGTTACGTACGTGCCCACCAGCTGCTGCCGCACAGCCCGGCG
ACCGTGTTTGCCAGCATGAATCTGGGTGTGGTCGTGTTGGGGGCACTGGTGGGCACATTGGGATTTGCCGAACGCCTGGG
CCTGCGCGGCTGGTTGGGGCTGGCACTGGCCGCACCGGCCATCGCGGCGATTGCCTGGGGAATACGCCTGGGTTGA

Upstream 100 bases:

>100_bases
CAGCCGATTCGGTGGGGAATGAGGGATTGGACATGCCTGCATAATAGCCGCCCCGCCGGCCGCGTTCATCGCCCTGCCTG
CACACTTCGTTGCGTTGCCC

Downstream 100 bases:

>100_bases
CGCCCGCTTTCGGCCTGCGCGACGTCGGTTCGCCATCCGCCTTCCGCGCCGGTTGGCGGTCGCTAGCATGAGCGTGCATT
CCCGCGGGAGTTTGTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRATTTPWLALLLLAVALPSIFLVLAR
SVAVAGVVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIVCIVRRPRQHLATDPLPSTTGLPWLIGVWMGF
ALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQGVRWARGARLSTRSMLAGVLLGALNFGNILCYVRAHQLLPHSPA
TVFASMNLGVVVLGALVGTLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG

Sequences:

>Translated_291_residues
MHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRATTTPWLALLLLAVALPSIFLVLAR
SVAVAGVVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIVCIVRRPRQHLATDPLPSTTGLPWLIGVWMGF
ALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQGVRWARGARLSTRSMLAGVLLGALNFGNILCYVRAHQLLPHSPA
TVFASMNLGVVVLGALVGTLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG
>Mature_291_residues
MHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRATTTPWLALLLLAVALPSIFLVLAR
SVAVAGVVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIVCIVRRPRQHLATDPLPSTTGLPWLIGVWMGF
ALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQGVRWARGARLSTRSMLAGVLLGALNFGNILCYVRAHQLLPHSPA
TVFASMNLGVVVLGALVGTLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30905; Mature: 30905

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRATTTP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLALLLLAVALPSIFLVLARSVAVAGVVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LALGMVAIVCIVRRPRQHLATDPLPSTTGLPWLIGVWMGFALIDLLLKHIAQAGTPSLTS
HHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LTLCFALAFLLMLGVQGVRWARGARLSTRSMLAGVLLGALNFGNILCYVRAHQLLPHSPA
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TVFASMNLGVVVLGALVGTLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG
HHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRATTTP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLALLLLAVALPSIFLVLARSVAVAGVVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LALGMVAIVCIVRRPRQHLATDPLPSTTGLPWLIGVWMGFALIDLLLKHIAQAGTPSLTS
HHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LTLCFALAFLLMLGVQGVRWARGARLSTRSMLAGVLLGALNFGNILCYVRAHQLLPHSPA
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TVFASMNLGVVVLGALVGTLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG
HHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]