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The map label for this gene is ykgJ [H]

Identifier: 78045798

GI number: 78045798

Start: 282758

End: 283141

Strand: Reverse

Name: ykgJ [H]

Synonym: XCV0242

Alternate gene names: 78045798

Gene position: 283141-282758 (Counterclockwise)

Preceding gene: 78045802

Following gene: 78045793

Centisome position: 5.47

GC content: 67.19

Gene sequence:

>384_bases
ATGGCACACCCCTGCCTTACCTGCGGCGCCTGCTGCGCCTATTTCCGCGTCAGTTTCCATTGGAGCGAAGCCGATCCTGC
ATTGGGCGGCAGGGTGCCGATCGAGCTGACCGACGCCCTACGCACGCATGAGCGGGTGATGCGCGGCACCTCGCAGTCGC
AACCGCGCTGCATCGCGCTGGATGCAGACATCGGGCGCTACAGCCGCTGCAGCATCCACGACCGCCGCCCCTCGTCCTGC
GCGGCCGTGCCGGCCTCGCTGGAATTCGGGCAGCGCAGTGCGCAATGCGATAAAGCGCGTTTGGCGCACGGCCTGCACGC
ACTGACCGATGCCGATTGGGTTGGCGTGGACGACGCACAACGCAACCCGCTGCCGCCGATGTAA

Upstream 100 bases:

>100_bases
TCGCTAACCGGTCACCGCGGCACGCTACTTGTATCGCGGCGCGGTTCGGTCAAAATGCCGCGCTTCCCACGCGATTTCGC
CGCGCCAGGCCCGGCACTCC

Downstream 100 bases:

>100_bases
CGCTATAGCGCAGCACCTTGTGTCGTGCTCGCAACCGCGTCGGCAGGCATCTGGCCGGGATGACCGATGCGCTGCATCGG
ATTTGGATGCAGTCATTCCA

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSC
AAVPASLEFGQRSAQCDKARLAHGLHALTDADWVGVDDAQRNPLPPM

Sequences:

>Translated_127_residues
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSC
AAVPASLEFGQRSAQCDKARLAHGLHALTDADWVGVDDAQRNPLPPM
>Mature_126_residues
AHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSCA
AVPASLEFGQRSAQCDKARLAHGLHALTDADWVGVDDAQRNPLPPM

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To A.calcoaceticus putative ferredoxin [H]

Homologues:

Organism=Escherichia coli, GI2367105, Length=106, Percent_Identity=47.1698113207547, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 13875; Mature: 13744

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIAL
CCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
DADIGRYSRCSIHDRRPSSCAAVPASLEFGQRSAQCDKARLAHGLHALTDADWVGVDDAQ
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RNPLPPM
CCCCCCC
>Mature Secondary Structure 
AHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIAL
CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
DADIGRYSRCSIHDRRPSSCAAVPASLEFGQRSAQCDKARLAHGLHALTDADWVGVDDAQ
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RNPLPPM
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]