| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045692
Identifier: 78045692
GI number: 78045692
Start: 159489
End: 159827
Strand: Reverse
Name: 78045692
Synonym: XCV0136
Alternate gene names: NA
Gene position: 159827-159489 (Counterclockwise)
Preceding gene: 78045693
Following gene: 78045685
Centisome position: 3.09
GC content: 59.88
Gene sequence:
>339_bases GTGGCGGCCACGGTACTGACCGAAGAAGGGCACGCAGGTGCAACCTATTTCCTCACTGGTCCCGAGACGCTCGACATGCA GGCAGCAACCTCGCGCCTATCGAAAATCATCGGGCGCAAGGTGCGTTATCTCGACCTGCCAACGCCGGTGTTTCGCGTAT TGATGCGTGCGACCGGCAACTCGCCATGGATGGCCAAGGGCCTGACCGTGCAATTCGCAGATGTGGTGGCAGGCCATCAC GACATCGATCCCACGTTCGAGATCGAGCGGCTCACCGGGAAGCGCCCGCATACATTCGATGACTTTGTTCGCGATCATCG GCAGGCGTTTGTGGGTTAG
Upstream 100 bases:
>100_bases GAATTTCCTGTGGTTCAAGGATCCGATCGCCAAGGGCGTGTTCCCGATGGCGGCAGGCCGGGGCAGCGTGTCGTAGATCG ACACCCGCGACATCGCACGC
Downstream 100 bases:
>100_bases CCGTTGGGGCCAGAGCAAGGGCTTCCAGTAGGTCCGAGCCGCCTTTTTGCCCAGATTCTGCTTCCAGTGGACCTATTTAA CGGCCTAAACCCGCCCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAATVLTEEGHAGATYFLTGPETLDMQAATSRLSKIIGRKVRYLDLPTPVFRVLMRATGNSPWMAKGLTVQFADVVAGHH DIDPTFEIERLTGKRPHTFDDFVRDHRQAFVG
Sequences:
>Translated_112_residues MAATVLTEEGHAGATYFLTGPETLDMQAATSRLSKIIGRKVRYLDLPTPVFRVLMRATGNSPWMAKGLTVQFADVVAGHH DIDPTFEIERLTGKRPHTFDDFVRDHRQAFVG >Mature_111_residues AATVLTEEGHAGATYFLTGPETLDMQAATSRLSKIIGRKVRYLDLPTPVFRVLMRATGNSPWMAKGLTVQFADVVAGHHD IDPTFEIERLTGKRPHTFDDFVRDHRQAFVG
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12470; Mature: 12339
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATVLTEEGHAGATYFLTGPETLDMQAATSRLSKIIGRKVRYLDLPTPVFRVLMRATGN CCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC SPWMAKGLTVQFADVVAGHHDIDPTFEIERLTGKRPHTFDDFVRDHRQAFVG CCCEECCCEEEHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AATVLTEEGHAGATYFLTGPETLDMQAATSRLSKIIGRKVRYLDLPTPVFRVLMRATGN CCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCC SPWMAKGLTVQFADVVAGHHDIDPTFEIERLTGKRPHTFDDFVRDHRQAFVG CCCEECCCEEEHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA