Click here to switch to the map view.

The map label for this gene is 78045624

Identifier: 78045624

GI number: 78045624

Start: 79153

End: 81039

Strand: Reverse

Name: 78045624

Synonym: XCV0068

Alternate gene names: NA

Gene position: 81039-79153 (Counterclockwise)

Preceding gene: 78045625

Following gene: 78045623

Centisome position: 1.56

GC content: 56.33

Gene sequence:

>1887_bases
ATGGCAACGCCTAGCCCGCAACTCGAAGCAGCTCTTGCCAGCTTTGCTGCATCCGGAGCCAGTCAAGATCAGGTAGCGCA
GTTGCGCGGAGCGCTGGTTGCTGATCCTAAACTAATGCAGCAGTTCGATCAGGAAGCAATAGCAGGCCATCTTCGGGGCT
TCGCACTACAGGCGGCTAACAGTTCGACACCTAATCTTACCGGAACCTACAACATACAGAGCGGGGTCGTTACCCTTCCC
GCAATAGGAATTCAATCTACAGGGACTGTAGCAAACAGTGATCTAAGAGCCAGTCTTCAAGTTCAGCAGATGTCTATAGC
GTTTGCACGCAGCGCTTACCAGGACGCTGCAAGAACTAGCCATCCTGTGACGCAAGATATGGTCGACAATTTGCAGTCCA
CCATCAATGGCTCGCCGTTTTTGGCTGATGAAGTCAAAAAGGCAGCCACCACAATTGACCAATCGGATGGACAACGCCCC
AAGAGAGCACAACTCGAGGCTTTTGGTTTCCTTGGGCCAGGCATGGCGGCTGGCGGTACCTACGATGGTGGCAACAAGAT
CATGAACTTGCCGCCGCTGGGTCTTCAAAGTAGCTCGGCCACCAACCTACATGGCAGGTTTAATGATAGAGACATGACAT
TTGTGTTGGGACACGAGATCCAGCATAGCTTTAATCATGCATCTAAGGCGCAGGCGACACAGAAATTTCTATCCGATGTC
GAAGCTCAGTCAAAGGTGCGAGGCCCCATACATGACTACACAGACGAGCTCCGGGCTTACATACAGGCCGGACGTGAGGA
CGAAGCAAAAGCAGAGATCGCAGGCTGGAACGCATTGCTGAGTCAGCAACAGCGTATCAATCCGCATGCAGGCCTCAAAG
CAATGCAGGCAACGCAGATTGATAGGGTTAATGACTTTGTCACGACAAATCCTTTAACGGGCGTTGCCGCCGGAAAGCAA
GGTTTGACTTTCAATCAGGACGGGAGCCTTTCTCAGACGTCAGGAAACATTGCGGCGATGGGTCATCATTATTTTGATCG
ACCCTCTCCGCTTTACTCGCAGCCTGGTCAACGTCCGGTAGGCATTGGCGAGCATCGCAATGCGATGGGTGCTCTTCAAC
CGACAGCAGACTACCCCAACTACTATGGCACCTGGGGAATAGAGCAGATCCTGCAAGCCGAAGATCGCGCGAACGTGATG
TATCAAGGTGCCCGGCCGCAAGTGACCATCGATATGGCAGCGCTGGGGCTCAAAGAACATTTGATCGAGAACGAAGGGCT
GGACCGAGGCGTCAACAAGTCACCGTTTCCGTATCAGGACACAAGTACCCGGCCGCCCACGCTGCATCATTTCGACCATA
CCCAGGATGGAAGCGTGAATCCCGCGCACGACCATACCTATGTTCCGGTTGTGCCCAGTGCGCCTGCTGCAACGGGCTCG
CTCGGGCCGGACGATCCTGCGCACCCGGATCACCGCATGCTGGAGCAGATTCGCAGTGGCGTCCGCAAGATCGACGAAAG
CGTGGGCAAGCCGTACGACGACATGAGCGAGCGCGTCAGCCGTAGCCTGCTGGCGGTGTGCAAGGACAACCGCGAGGCCT
ACCCGGCTGCAGGGGATCGCTCGCTGGCAGACAATGCGTTGAGCCGCGTGGACCATGTTGTGATGGGCAAGACCGGCAAC
GTGTTTGCGGTAGAAGGGCGGCTGGATGACCCAGCGCACAGGCGGGTGCACGTGGAGATCGACCAGGCAATCCGCACCCC
GGTGGAACAGTCGGACCAGAAACTCCTGGCGGCCAACCAAGCCATTGCGCAGGAAAGGGCGCTGACGCAGCAGCAAGAGC
TGGCGCGTGGAATGAACGAGCCTAACCAGGGCAGCCTGTCCCGCTAG

Upstream 100 bases:

>100_bases
ATTGTGATCTCGCTTGTCCCCCAAAATGAAGCGCCTGGTTCTCCCGGCAGGCTATGTGTTAAATCAATTGGAACGTTGAA
CTAACCAAGGATGGAAGCTG

Downstream 100 bases:

>100_bases
ATCGCACGCTTGCGGAGCACCACGACGCCATCAGAGCCCGATGGCGGTCTGCGTTGCATCACCTCACACCGCTTGATACA
CGCCAAACCCGCAGTACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MATPSPQLEAALASFAASGASQDQVAQLRGALVADPKLMQQFDQEAIAGHLRGFALQAANSSTPNLTGTYNIQSGVVTLP
AIGIQSTGTVANSDLRASLQVQQMSIAFARSAYQDAARTSHPVTQDMVDNLQSTINGSPFLADEVKKAATTIDQSDGQRP
KRAQLEAFGFLGPGMAAGGTYDGGNKIMNLPPLGLQSSSATNLHGRFNDRDMTFVLGHEIQHSFNHASKAQATQKFLSDV
EAQSKVRGPIHDYTDELRAYIQAGREDEAKAEIAGWNALLSQQQRINPHAGLKAMQATQIDRVNDFVTTNPLTGVAAGKQ
GLTFNQDGSLSQTSGNIAAMGHHYFDRPSPLYSQPGQRPVGIGEHRNAMGALQPTADYPNYYGTWGIEQILQAEDRANVM
YQGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPAHDHTYVPVVPSAPAATGS
LGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSLADNALSRVDHVVMGKTGN
VFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQELARGMNEPNQGSLSR

Sequences:

>Translated_628_residues
MATPSPQLEAALASFAASGASQDQVAQLRGALVADPKLMQQFDQEAIAGHLRGFALQAANSSTPNLTGTYNIQSGVVTLP
AIGIQSTGTVANSDLRASLQVQQMSIAFARSAYQDAARTSHPVTQDMVDNLQSTINGSPFLADEVKKAATTIDQSDGQRP
KRAQLEAFGFLGPGMAAGGTYDGGNKIMNLPPLGLQSSSATNLHGRFNDRDMTFVLGHEIQHSFNHASKAQATQKFLSDV
EAQSKVRGPIHDYTDELRAYIQAGREDEAKAEIAGWNALLSQQQRINPHAGLKAMQATQIDRVNDFVTTNPLTGVAAGKQ
GLTFNQDGSLSQTSGNIAAMGHHYFDRPSPLYSQPGQRPVGIGEHRNAMGALQPTADYPNYYGTWGIEQILQAEDRANVM
YQGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPAHDHTYVPVVPSAPAATGS
LGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSLADNALSRVDHVVMGKTGN
VFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQELARGMNEPNQGSLSR
>Mature_627_residues
ATPSPQLEAALASFAASGASQDQVAQLRGALVADPKLMQQFDQEAIAGHLRGFALQAANSSTPNLTGTYNIQSGVVTLPA
IGIQSTGTVANSDLRASLQVQQMSIAFARSAYQDAARTSHPVTQDMVDNLQSTINGSPFLADEVKKAATTIDQSDGQRPK
RAQLEAFGFLGPGMAAGGTYDGGNKIMNLPPLGLQSSSATNLHGRFNDRDMTFVLGHEIQHSFNHASKAQATQKFLSDVE
AQSKVRGPIHDYTDELRAYIQAGREDEAKAEIAGWNALLSQQQRINPHAGLKAMQATQIDRVNDFVTTNPLTGVAAGKQG
LTFNQDGSLSQTSGNIAAMGHHYFDRPSPLYSQPGQRPVGIGEHRNAMGALQPTADYPNYYGTWGIEQILQAEDRANVMY
QGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPAHDHTYVPVVPSAPAATGSL
GPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSLADNALSRVDHVVMGKTGNV
FAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQELARGMNEPNQGSLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67773; Mature: 67642

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSPQLEAALASFAASGASQDQVAQLRGALVADPKLMQQFDQEAIAGHLRGFALQAAN
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECC
SSTPNLTGTYNIQSGVVTLPAIGIQSTGTVANSDLRASLQVQQMSIAFARSAYQDAARTS
CCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
HPVTQDMVDNLQSTINGSPFLADEVKKAATTIDQSDGQRPKRAQLEAFGFLGPGMAAGGT
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC
YDGGNKIMNLPPLGLQSSSATNLHGRFNDRDMTFVLGHEIQHSFNHASKAQATQKFLSDV
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
EAQSKVRGPIHDYTDELRAYIQAGREDEAKAEIAGWNALLSQQQRINPHAGLKAMQATQI
HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DRVNDFVTTNPLTGVAAGKQGLTFNQDGSLSQTSGNIAAMGHHYFDRPSPLYSQPGQRPV
HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCHHCCCCCCHHCCCCCCCC
GIGEHRNAMGALQPTADYPNYYGTWGIEQILQAEDRANVMYQGARPQVTIDMAALGLKEH
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHH
LIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPAHDHTYVPVVPSAPAATGS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
LGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SLADNALSRVDHVVMGKTGNVFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQ
HHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHH
AIAQERALTQQQELARGMNEPNQGSLSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATPSPQLEAALASFAASGASQDQVAQLRGALVADPKLMQQFDQEAIAGHLRGFALQAAN
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECC
SSTPNLTGTYNIQSGVVTLPAIGIQSTGTVANSDLRASLQVQQMSIAFARSAYQDAARTS
CCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
HPVTQDMVDNLQSTINGSPFLADEVKKAATTIDQSDGQRPKRAQLEAFGFLGPGMAAGGT
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC
YDGGNKIMNLPPLGLQSSSATNLHGRFNDRDMTFVLGHEIQHSFNHASKAQATQKFLSDV
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
EAQSKVRGPIHDYTDELRAYIQAGREDEAKAEIAGWNALLSQQQRINPHAGLKAMQATQI
HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DRVNDFVTTNPLTGVAAGKQGLTFNQDGSLSQTSGNIAAMGHHYFDRPSPLYSQPGQRPV
HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCHHCCCCCCHHCCCCCCCC
GIGEHRNAMGALQPTADYPNYYGTWGIEQILQAEDRANVMYQGARPQVTIDMAALGLKEH
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHH
LIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPAHDHTYVPVVPSAPAATGS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
LGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SLADNALSRVDHVVMGKTGNVFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQ
HHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHH
AIAQERALTQQQELARGMNEPNQGSLSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA