| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045594
Identifier: 78045594
GI number: 78045594
Start: 45094
End: 45474
Strand: Reverse
Name: 78045594
Synonym: XCV0038
Alternate gene names: NA
Gene position: 45474-45094 (Counterclockwise)
Preceding gene: 78045596
Following gene: 78045593
Centisome position: 0.88
GC content: 64.83
Gene sequence:
>381_bases ATGCGCGCTGTTCTACCTGTTGCTCGCCTGACCTGCACCCTGGTGATGCTGGCTGCATTGACTGCCTGCAACAAACCGCA ACCCGATGAGCAGGAAGCCGTCACCGCCAAGGCCCAGCACGCGGCCGAACAAGCCGCTGCGCCCGCACCGGATGCAGCGC CGGAAGCGCCGCCGATCGGCACTTGCGATGCCACCCAGGTGCAATCGCTGGTGGGCCAGCCGTTGACCGATGCGGTGGGC GAACAGGCACGCAGCGATGCCGGCGCCAAGTCGGTGCGTGTGCTCAAACCCGGCCAGATGACCACCATGGAATTCAATGG CGAACGGCTCAATCTGGAAGTGGACGCCAAGAACGTGATCACCTCGGTGCGCTGCGGCTGA
Upstream 100 bases:
>100_bases CTAGGCTGCGTCAACGCTACGACAACGCCCTGTGCGCAAGCCATGCCCGTCGCGTGACTTTGTGCTTATGCTTGGGCATC CCCCTTTGCTGGAGTGATCG
Downstream 100 bases:
>100_bases GACGGCCTTGGCGCCTGTCGCAAGACCGGCGCCAAGCCTGCTGGCACAAGGGGTTGCAGCGGTTCTCGTTGCAGCTGTAA CGGTGTATTGCGGCACCGCA
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRAVLPVARLTCTLVMLAALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGTCDATQVQSLVGQPLTDAVG EQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVITSVRCG
Sequences:
>Translated_126_residues MRAVLPVARLTCTLVMLAALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGTCDATQVQSLVGQPLTDAVG EQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVITSVRCG >Mature_126_residues MRAVLPVARLTCTLVMLAALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIGTCDATQVQSLVGQPLTDAVG EQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVITSVRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13063; Mature: 13063
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVLPVARLTCTLVMLAALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TCDATQVQSLVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVI CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHH TSVRCG HHCCCC >Mature Secondary Structure MRAVLPVARLTCTLVMLAALTACNKPQPDEQEAVTAKAQHAAEQAAAPAPDAAPEAPPIG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TCDATQVQSLVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVI CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHH TSVRCG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA