| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045586
Identifier: 78045586
GI number: 78045586
Start: 32993
End: 33280
Strand: Reverse
Name: 78045586
Synonym: XCV0030
Alternate gene names: NA
Gene position: 33280-32993 (Counterclockwise)
Preceding gene: 78045587
Following gene: 78045585
Centisome position: 0.64
GC content: 62.85
Gene sequence:
>288_bases ATGTGTCCACGCAAACGCCTGCGGCGCCCGCCTGACGCCCGCGCGCAGGTGCTTTCGCTGCTGTTCGCAACGACAGCGCC AGTGCAGGCACGTGCGGGCGCCGCAGGCAATCGTCATCACACGTCGCTCTTCCATCCGGTAGCGAGCGCGCTTTCTACCG GGCTGAGCATTGCCGCGATTGGCCACTTTTCCTGGTCTTTTCGCGGAAAGATCGAGGCAGCCTATGCCTGCAACCTCGGT GGCACTTCAATGCGGCATGGCGTCATGGACATGACGTCATGCCACTGA
Upstream 100 bases:
>100_bases ATTGGGCCCACGTGCGCGCCGGATTACCGATTAAGCGCGACCAACGCGCCTAGCAAATAGTCGTCAGCTGGGCGCGGATG GCACGCAAACCACACCGTAG
Downstream 100 bases:
>100_bases CGGCAGGCGCTTCCATACGACGCAAAGTCGACAGCACGGACGAACCCGTGCCGCACTTGCGCAAATACCGGCCCATATCT CGCGCTTTTGTGCGGCCTAT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MCPRKRLRRPPDARAQVLSLLFATTAPVQARAGAAGNRHHTSLFHPVASALSTGLSIAAIGHFSWSFRGKIEAAYACNLG GTSMRHGVMDMTSCH
Sequences:
>Translated_95_residues MCPRKRLRRPPDARAQVLSLLFATTAPVQARAGAAGNRHHTSLFHPVASALSTGLSIAAIGHFSWSFRGKIEAAYACNLG GTSMRHGVMDMTSCH >Mature_95_residues MCPRKRLRRPPDARAQVLSLLFATTAPVQARAGAAGNRHHTSLFHPVASALSTGLSIAAIGHFSWSFRGKIEAAYACNLG GTSMRHGVMDMTSCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10159; Mature: 10159
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPRKRLRRPPDARAQVLSLLFATTAPVQARAGAAGNRHHTSLFHPVASALSTGLSIAAI CCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE GHFSWSFRGKIEAAYACNLGGTSMRHGVMDMTSCH CCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCC >Mature Secondary Structure MCPRKRLRRPPDARAQVLSLLFATTAPVQARAGAAGNRHHTSLFHPVASALSTGLSIAAI CCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE GHFSWSFRGKIEAAYACNLGGTSMRHGVMDMTSCH CCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA