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The map label for this gene is pdxJ [H]

Identifier: 78045569

GI number: 78045569

Start: 14248

End: 15015

Strand: Reverse

Name: pdxJ [H]

Synonym: XCV0013

Alternate gene names: 78045569

Gene position: 15015-14248 (Counterclockwise)

Preceding gene: 78045570

Following gene: NA

Centisome position: 0.29

GC content: 67.71

Gene sequence:

>768_bases
ATGACCACCCAGCTCAGCGTCAACGTCAACAAGATTGCAGTCCTGCGCAACTCGCGCGGGGGCGCCGACCCGGACGTGGT
GCAGGCCGCACGCGCCTGCATTGCCGCCGGCGCACACGGCATCACCGTGCATCCGCGCCCGGACCAGCGGCATATCCGCG
CCGACGACGTGCTGGCGCTCAGTGCACTCACGCGCGCGCAGGCGGTGGAATTCAATATCGAAGGCAACCCCTTCGCGCCG
CCGCGCGCAGGCTACCCGGGGTTGCTGGAATTGTGCCGTGCCACGCGCCCGCAACAGATCACCCTGGTGCCGGACGGCGA
CGGGCAGCTGACCTCCGATCACGGCTTCGATTTTGCGCAGGACACCACGCAGCTCGCCGAGCTGATCACCGCGTTCAAGC
AGCTGGGCAGCCGGGTCAGCCTGTTCGTCGATGCGGGTAACCCGGACATCGCCCGCGCAGCCGCGCTCGGTGCGGACCGT
ATCGAGTTGTACACCGGCCCGTATGCCCACGCGCACGCCAGCGGCCAGGCCGATGCCACGTTGGCGCTGTTCGCCGATGC
CGCGCAGCGCGCCAGTGCCGCAGGCCTGGGCATCAATGCCGGGCACGATTTGTCGCAAGCCAACCTGGGCGATTTTCTCG
CCGCTGTGCCGGGGGTGCTGGAAGTATCCATCGGCCACGCCTTGATCAGCGAGGCCTTGTACCAGGGATTGGATGCAAGC
GTGCGCGCGTACGTCGACATCCTGCGTGGCAGCCACGTTAGCGCTTGA

Upstream 100 bases:

>100_bases
GACCCGGCCGAGCTGCGCCGCCTGCGCGAGCTGGCAGAAGCACGCAAGTCGGCCGCCCTGGCCGCCGCACGCGACAGCGA
GCCGCAGGCCTGATCACCGC

Downstream 100 bases:

>100_bases
GTCCATGCGCTAACGTCGGCATCGATGATCGATGCCCGGGTTGGCGACAACCACGTTCGCGTGGTGGATGCTACGCAGGA
ACATCACGACGAGCGCCTGG

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTTQLSVNVNKIAVLRNSRGGADPDVVQAARACIAAGAHGITVHPRPDQRHIRADDVLALSALTRAQAVEFNIEGNPFAP
PRAGYPGLLELCRATRPQQITLVPDGDGQLTSDHGFDFAQDTTQLAELITAFKQLGSRVSLFVDAGNPDIARAAALGADR
IELYTGPYAHAHASGQADATLALFADAAQRASAAGLGINAGHDLSQANLGDFLAAVPGVLEVSIGHALISEALYQGLDAS
VRAYVDILRGSHVSA

Sequences:

>Translated_255_residues
MTTQLSVNVNKIAVLRNSRGGADPDVVQAARACIAAGAHGITVHPRPDQRHIRADDVLALSALTRAQAVEFNIEGNPFAP
PRAGYPGLLELCRATRPQQITLVPDGDGQLTSDHGFDFAQDTTQLAELITAFKQLGSRVSLFVDAGNPDIARAAALGADR
IELYTGPYAHAHASGQADATLALFADAAQRASAAGLGINAGHDLSQANLGDFLAAVPGVLEVSIGHALISEALYQGLDAS
VRAYVDILRGSHVSA
>Mature_254_residues
TTQLSVNVNKIAVLRNSRGGADPDVVQAARACIAAGAHGITVHPRPDQRHIRADDVLALSALTRAQAVEFNIEGNPFAPP
RAGYPGLLELCRATRPQQITLVPDGDGQLTSDHGFDFAQDTTQLAELITAFKQLGSRVSLFVDAGNPDIARAAALGADRI
ELYTGPYAHAHASGQADATLALFADAAQRASAAGLGINAGHDLSQANLGDFLAAVPGVLEVSIGHALISEALYQGLDASV
RAYVDILRGSHVSA

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=237, Percent_Identity=38.8185654008439, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 26527; Mature: 26396

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQLSVNVNKIAVLRNSRGGADPDVVQAARACIAAGAHGITVHPRPDQRHIRADDVLAL
CCCEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH
SALTRAQAVEFNIEGNPFAPPRAGYPGLLELCRATRPQQITLVPDGDGQLTSDHGFDFAQ
HHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHH
DTTQLAELITAFKQLGSRVSLFVDAGNPDIARAAALGADRIELYTGPYAHAHASGQADAT
HHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCEEEEEECCCHHCCCCCCCCEE
LALFADAAQRASAAGLGINAGHDLSQANLGDFLAAVPGVLEVSIGHALISEALYQGLDAS
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHH
VRAYVDILRGSHVSA
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTQLSVNVNKIAVLRNSRGGADPDVVQAARACIAAGAHGITVHPRPDQRHIRADDVLAL
CCEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH
SALTRAQAVEFNIEGNPFAPPRAGYPGLLELCRATRPQQITLVPDGDGQLTSDHGFDFAQ
HHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHH
DTTQLAELITAFKQLGSRVSLFVDAGNPDIARAAALGADRIELYTGPYAHAHASGQADAT
HHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCEEEEEECCCHHCCCCCCCCEE
LALFADAAQRASAAGLGINAGHDLSQANLGDFLAAVPGVLEVSIGHALISEALYQGLDAS
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHH
VRAYVDILRGSHVSA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA