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The map label for this gene is glyQ [H]

Identifier: 78045220

GI number: 78045220

Start: 383147

End: 384019

Strand: Direct

Name: glyQ [H]

Synonym: CHY_0439

Alternate gene names: 78045220

Gene position: 383147-384019 (Clockwise)

Preceding gene: 78044245

Following gene: 78042751

Centisome position: 15.95

GC content: 46.96

Gene sequence:

>873_bases
ATGCTTACTTTTCAGGAGATTATTTTAAAGCTAAACGAATACTGGGGGCAGCAAGGTTGCATTATTGCTCAGCCTTACGA
TACCGAAAAAGGGGCCGGAACTATGAATCCTCATACCTTTTTGCGGGCTTTGGGACCGGAACCCTGGCGGGTGGCTTATG
TAGAGCCGTCGCGAAGACCAACCGACGGACGGTACGGAGAAAACCCCAACCGCTTGCAACATTATTACCAGTATCAGGTG
ATTTTAAAGCCCAACCCCGATAATGTGGTGGAGCTTTATATGGATAGCTTAAGATACCTGGGAATTAACCTCGAAGAGCA
CGATTTTCGCCTGGTGGAGGATAACTGGGAGTCCCCAACTTTAGGAGCCTGGGGTCTTGGCTGGGAAGTATGGCTTGATG
GTATGGAGATTACCCAGTTTACCTATTTTCAGCAATGCGGCGGTATTGACCTTCCGGTAGTATCGGCGGAAATAACCTAT
GGGTTAGAGCGGATCGCTATGTACCTTCAGAAAAAAGATAGCGTTTATGACATTGTCTGGGTCGATGGAATAACTTACGG
GGACGTTCACTTAATGGGGGAAATTGAAAACTCCAAATATAACTTTGAGCTGGCCGATGTGGATAAGCTTTTTTCCTGGT
TTAAAGATTTTGAGGCGGAGGCAAAACGTCTAATTGAAGCGGGAGTGGTTCTGCCGGCTTACGATTTTGTCCTAAAATGC
TCCCACACCTTTAACCTTTTAGACGCCCGGGGAGCAATTTCGGTAACCGAAAGAACGGCGTATATCGGGAGAATCAGAAA
CTTGGCTCGCCTGGTTGCGCAGAAGTACATTGAGCAGCGGGAGAGTCTCGGTTTTCCGCTTTTAAAAAAATAA

Upstream 100 bases:

>100_bases
CCGGGACAAAGGGGCTTTAAATTTATTAAGGTGTTTGTTTTTATTAGTTTTTCCAATTTCCAACATCCAACTTCTAATAT
CTAATATGGGGGTGTTTTTT

Downstream 100 bases:

>100_bases
TTTAGGGGGGAGAAAAAATGGACTACTTACTGGAAATTGGTGTTGAAGAAATACCGGCGCGCTTTATTCCCGGGATTATT
GAGGAGGTCAAAAATAAAGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLTFQEIILKLNEYWGQQGCIIAQPYDTEKGAGTMNPHTFLRALGPEPWRVAYVEPSRRPTDGRYGENPNRLQHYYQYQV
ILKPNPDNVVELYMDSLRYLGINLEEHDFRLVEDNWESPTLGAWGLGWEVWLDGMEITQFTYFQQCGGIDLPVVSAEITY
GLERIAMYLQKKDSVYDIVWVDGITYGDVHLMGEIENSKYNFELADVDKLFSWFKDFEAEAKRLIEAGVVLPAYDFVLKC
SHTFNLLDARGAISVTERTAYIGRIRNLARLVAQKYIEQRESLGFPLLKK

Sequences:

>Translated_290_residues
MLTFQEIILKLNEYWGQQGCIIAQPYDTEKGAGTMNPHTFLRALGPEPWRVAYVEPSRRPTDGRYGENPNRLQHYYQYQV
ILKPNPDNVVELYMDSLRYLGINLEEHDFRLVEDNWESPTLGAWGLGWEVWLDGMEITQFTYFQQCGGIDLPVVSAEITY
GLERIAMYLQKKDSVYDIVWVDGITYGDVHLMGEIENSKYNFELADVDKLFSWFKDFEAEAKRLIEAGVVLPAYDFVLKC
SHTFNLLDARGAISVTERTAYIGRIRNLARLVAQKYIEQRESLGFPLLKK
>Mature_290_residues
MLTFQEIILKLNEYWGQQGCIIAQPYDTEKGAGTMNPHTFLRALGPEPWRVAYVEPSRRPTDGRYGENPNRLQHYYQYQV
ILKPNPDNVVELYMDSLRYLGINLEEHDFRLVEDNWESPTLGAWGLGWEVWLDGMEITQFTYFQQCGGIDLPVVSAEITY
GLERIAMYLQKKDSVYDIVWVDGITYGDVHLMGEIENSKYNFELADVDKLFSWFKDFEAEAKRLIEAGVVLPAYDFVLKC
SHTFNLLDARGAISVTERTAYIGRIRNLARLVAQKYIEQRESLGFPLLKK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=294, Percent_Identity=63.6054421768708, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 33589; Mature: 33589

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQEIILKLNEYWGQQGCIIAQPYDTEKGAGTMNPHTFLRALGPEPWRVAYVEPSRRP
CCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC
TDGRYGENPNRLQHYYQYQVILKPNPDNVVELYMDSLRYLGINLEEHDFRLVEDNWESPT
CCCCCCCCHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEITQFTYFQQCGGIDLPVVSAEITYGLERIAMYLQKKDSVYDIVW
CCCCCCCHHHEECCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEE
VDGITYGDVHLMGEIENSKYNFELADVDKLFSWFKDFEAEAKRLIEAGVVLPAYDFVLKC
ECCEEECCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEC
SHTFNLLDARGAISVTERTAYIGRIRNLARLVAQKYIEQRESLGFPLLKK
CCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLTFQEIILKLNEYWGQQGCIIAQPYDTEKGAGTMNPHTFLRALGPEPWRVAYVEPSRRP
CCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC
TDGRYGENPNRLQHYYQYQVILKPNPDNVVELYMDSLRYLGINLEEHDFRLVEDNWESPT
CCCCCCCCHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEITQFTYFQQCGGIDLPVVSAEITYGLERIAMYLQKKDSVYDIVW
CCCCCCCHHHEECCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEE
VDGITYGDVHLMGEIENSKYNFELADVDKLFSWFKDFEAEAKRLIEAGVVLPAYDFVLKC
ECCEEECCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEC
SHTFNLLDARGAISVTERTAYIGRIRNLARLVAQKYIEQRESLGFPLLKK
CCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA