| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78045219
Identifier: 78045219
GI number: 78045219
Start: 17312
End: 17863
Strand: Direct
Name: 78045219
Synonym: CHY_0022
Alternate gene names: NA
Gene position: 17312-17863 (Clockwise)
Preceding gene: 78044479
Following gene: 78043016
Centisome position: 0.72
GC content: 36.05
Gene sequence:
>552_bases ATGAGCTTCAATACCCTTGATTATTTACTGCTGGGATTGTTTTTATTTTTATTATTTAAAGGAAGCCGGGAAGGAATTTT GGGACTTCCGGTAAAAATTACTGCCCTTGCAGGTGGGGTCATAGTTTCATTTTTATGGGGGGACATGCTGTTTCCCAAAG TTATTCCTGCTTTTTTACCCTATCTTCCGCAAAGCCTGAAAAATCAGTACTTACCGGTGTTTTTTAAAGGGGTTTTATTT TTAGTAACGGCAGTCTTAATCTGGAAAGCCGGGGGAAGTATAAGACGGGGTCTTAGAAAAACTCCATTAGGAATTATAGA TTCTCTTTTGGGAATTTTTTATAATGGAGTGAAAGGGGTTATTTTTTTAGTGGTGTTATCTCTTATTTTAATACCGTTGG CAGGGGTTTTGATTAAGACTTCTCTTGGGGGAGAGATTAAAGACTTTTTAAGTTTGGTTCAAAATTCTCTGGTTTTAAAT TACTTCTTTACCTTAGTTAAAGATGGCATTTCAACCTTTACAGGAATAAAGGAGGCTAAGCTATGGATTTAA
Upstream 100 bases:
>100_bases CCTGGTGAAATATCTTTATCCCCTTTTTGGCTATGCCGGTTTTTTATTTTTATATTGTTTGTTAAAATTATTAATAGGAA TAAAATGGTAGGTGGTTAGT
Downstream 100 bases:
>100_bases TGTTAAAACGGGAAAATATTTTTTCCAACACAAAAGACCAAAATCCAATCTACCTGTTTAATAGGGAGTATCTTGATTTT TTAAGCGGTTGTAAAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSFNTLDYLLLGLFLFLLFKGSREGILGLPVKITALAGGVIVSFLWGDMLFPKVIPAFLPYLPQSLKNQYLPVFFKGVLF LVTAVLIWKAGGSIRRGLRKTPLGIIDSLLGIFYNGVKGVIFLVVLSLILIPLAGVLIKTSLGGEIKDFLSLVQNSLVLN YFFTLVKDGISTFTGIKEAKLWI
Sequences:
>Translated_183_residues MSFNTLDYLLLGLFLFLLFKGSREGILGLPVKITALAGGVIVSFLWGDMLFPKVIPAFLPYLPQSLKNQYLPVFFKGVLF LVTAVLIWKAGGSIRRGLRKTPLGIIDSLLGIFYNGVKGVIFLVVLSLILIPLAGVLIKTSLGGEIKDFLSLVQNSLVLN YFFTLVKDGISTFTGIKEAKLWI >Mature_182_residues SFNTLDYLLLGLFLFLLFKGSREGILGLPVKITALAGGVIVSFLWGDMLFPKVIPAFLPYLPQSLKNQYLPVFFKGVLFL VTAVLIWKAGGSIRRGLRKTPLGIIDSLLGIFYNGVKGVIFLVVLSLILIPLAGVLIKTSLGGEIKDFLSLVQNSLVLNY FFTLVKDGISTFTGIKEAKLWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20098; Mature: 19967
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNTLDYLLLGLFLFLLFKGSREGILGLPVKITALAGGVIVSFLWGDMLFPKVIPAFLP CCCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLPQSLKNQYLPVFFKGVLFLVTAVLIWKAGGSIRRGLRKTPLGIIDSLLGIFYNGVKGV HCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH IFLVVLSLILIPLAGVLIKTSLGGEIKDFLSLVQNSLVLNYFFTLVKDGISTFTGIKEAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWI CCC >Mature Secondary Structure SFNTLDYLLLGLFLFLLFKGSREGILGLPVKITALAGGVIVSFLWGDMLFPKVIPAFLP CCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLPQSLKNQYLPVFFKGVLFLVTAVLIWKAGGSIRRGLRKTPLGIIDSLLGIFYNGVKGV HCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH IFLVVLSLILIPLAGVLIKTSLGGEIKDFLSLVQNSLVLNYFFTLVKDGISTFTGIKEAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA