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The map label for this gene is yugU [H]

Identifier: 78045193

GI number: 78045193

Start: 801650

End: 802033

Strand: Direct

Name: yugU [H]

Synonym: CHY_0907

Alternate gene names: 78045193

Gene position: 801650-802033 (Clockwise)

Preceding gene: 78042876

Following gene: 78043471

Centisome position: 33.38

GC content: 44.27

Gene sequence:

>384_bases
GTGGAAGTAATAAAAGTTAGCAGCTCAAGAAAAATTGAGCTAATTGATATCACAGCCAGAGTAGCTGAGAAAGTTTGTAA
TTTTCCCGAAGCAAAGGCCCTAATGCTTTTTGTTCCTCACACTACCGCCGGGATTTTAATTAATGAAAATGCCGATCCCG
ATGTCAAAAGGGACTTAGAAATGTATTTTGCGAAAGTTGTTCCTGAACTTCCCTTTCGGCACTTCGAGGGAAACTCCCCG
GCTCACATCCTGTCTTCTTTAGTGGGGGTATCGTTGTATGTGCCAATCAATCAGGGAAAGCTTGGTCTTGGAACCTGGCA
GGGGATTTACTTTGCGGAATTTGATGGCCCCCGGGAGCGCAAGGTTTACTTAACTCCAGTTTAA

Upstream 100 bases:

>100_bases
ACGTGCGGCTAAAAGACCTGCGTCAGGTAGTTACCGCTGTTGCTGATGGAGCTCAGGCTGCGGTAGCGGCGGAAAAGTAT
CTGGAGGGAAATAAATAGCC

Downstream 100 bases:

>100_bases
AATTTTAAATAAAAAAGCCGCAAAACCCATGAAGGTTTTGCGGCTTTTAAAATATATATAGAGAAAAGGGAGAGGAGATT
AGGCTTCGATATAAGTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEVIKVSSSRKIELIDITARVAEKVCNFPEAKALMLFVPHTTAGILINENADPDVKRDLEMYFAKVVPELPFRHFEGNSP
AHILSSLVGVSLYVPINQGKLGLGTWQGIYFAEFDGPRERKVYLTPV

Sequences:

>Translated_127_residues
MEVIKVSSSRKIELIDITARVAEKVCNFPEAKALMLFVPHTTAGILINENADPDVKRDLEMYFAKVVPELPFRHFEGNSP
AHILSSLVGVSLYVPINQGKLGLGTWQGIYFAEFDGPRERKVYLTPV
>Mature_127_residues
MEVIKVSSSRKIELIDITARVAEKVCNFPEAKALMLFVPHTTAGILINENADPDVKRDLEMYFAKVVPELPFRHFEGNSP
AHILSSLVGVSLYVPINQGKLGLGTWQGIYFAEFDGPRERKVYLTPV

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=113, Percent_Identity=36.283185840708, Blast_Score=81, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221476589, Length=91, Percent_Identity=48.3516483516484, Blast_Score=89, Evalue=9e-19,
Organism=Drosophila melanogaster, GI221476594, Length=91, Percent_Identity=48.3516483516484, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14202; Mature: 14202

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVIKVSSSRKIELIDITARVAEKVCNFPEAKALMLFVPHTTAGILINENADPDVKRDLE
CCEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHH
MYFAKVVPELPFRHFEGNSPAHILSSLVGVSLYVPINQGKLGLGTWQGIYFAEFDGPRER
HHHHHHCCCCCCEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEEECCCCCCC
KVYLTPV
EEEEECC
>Mature Secondary Structure
MEVIKVSSSRKIELIDITARVAEKVCNFPEAKALMLFVPHTTAGILINENADPDVKRDLE
CCEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHH
MYFAKVVPELPFRHFEGNSPAHILSSLVGVSLYVPINQGKLGLGTWQGIYFAEFDGPRER
HHHHHHCCCCCCEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEEECCCCCCC
KVYLTPV
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]