Click here to switch to the map view.

The map label for this gene is ycdX [C]

Identifier: 78045190

GI number: 78045190

Start: 237591

End: 238334

Strand: Direct

Name: ycdX [C]

Synonym: CHY_0271

Alternate gene names: 78045190

Gene position: 237591-238334 (Clockwise)

Preceding gene: 78043126

Following gene: 78044116

Centisome position: 9.89

GC content: 42.74

Gene sequence:

>744_bases
ATGTTTTCCGGTGATTTTCATACCCATACCCGCTATAGCGATGGCCGGGGAAGTTTACGGGAAAATGTCTGGGCAGCTTT
AAAGAAAGGTTTACTTTTTTACGGAGTTTCCGACCACGGTCCGGCCAATATTGGTACCGGGGTACGGCAGGAAAAGGTCT
ATTTAACCATCAAAGAAGAAGCGCGGAATCTTGAAAAAGAATTTTCCAAAATTAAAATACTGGTGGGGGCGGAAGCAAAT
GTTATTTCATTAGAGGGGGATATTGATATTAGCAGGGAAATTGTTTCCGCCCTTGACTTTTTAATTATTGGTCTTCACCC
GTATGTTTTACCCAAAACTTTAAAAGATGGCTTTTTGTTTGTCCTTCCTAACCTGTTAGGCCGGCTTTTTTCCGGTATAA
AAAAGTATCTTGTCCGGGTAAATACCCGGGCGTTAATCCGGGCAATAGAAAAATACCGCCCCCTGGTAATAAGTCATCCC
AACCTTTTTCTACCCGTGGATTTAGAGGAACTGGCGCAGGTTTGTGCTAAATACGGGGTGGCGTTGGAAATAAATACCGG
ACATAACTATCCCAAGGATGAGATAGTTCTGGCAGCTTTAAAAACGGGAGCAAAACTGATGGTTAACAGTGACGCCCACT
ACCCCCAAACGGTGGGCGAACTAAAAAGCGGGGAAGAGCTTTTGCTGCGTTATAATTTTCCTTTGGACAGGGTTTTGAAT
ATAAAAAGATCTGAATTAAATTAA

Upstream 100 bases:

>100_bases
AAAGATTTAACGGTAAAAAAAGCTGTTTTAGGGAGTAAAACCGGAGTCATGGGAGCGATAGCTTTAGCCTTGGAGCGGTT
TTCTTAAAGGATGGGATCAA

Downstream 100 bases:

>100_bases
ACGGTGGGTGGAATAATGCGCTTTTTAATTGTAACGGGACTATCCGGAGCTGGTAAAACGCAGGCAATGCGCGCTTTAGA
AGATCTTGGCTATTTTTGCG

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFSGDFHTHTRYSDGRGSLRENVWAALKKGLLFYGVSDHGPANIGTGVRQEKVYLTIKEEARNLEKEFSKIKILVGAEAN
VISLEGDIDISREIVSALDFLIIGLHPYVLPKTLKDGFLFVLPNLLGRLFSGIKKYLVRVNTRALIRAIEKYRPLVISHP
NLFLPVDLEELAQVCAKYGVALEINTGHNYPKDEIVLAALKTGAKLMVNSDAHYPQTVGELKSGEELLLRYNFPLDRVLN
IKRSELN

Sequences:

>Translated_247_residues
MFSGDFHTHTRYSDGRGSLRENVWAALKKGLLFYGVSDHGPANIGTGVRQEKVYLTIKEEARNLEKEFSKIKILVGAEAN
VISLEGDIDISREIVSALDFLIIGLHPYVLPKTLKDGFLFVLPNLLGRLFSGIKKYLVRVNTRALIRAIEKYRPLVISHP
NLFLPVDLEELAQVCAKYGVALEINTGHNYPKDEIVLAALKTGAKLMVNSDAHYPQTVGELKSGEELLLRYNFPLDRVLN
IKRSELN
>Mature_247_residues
MFSGDFHTHTRYSDGRGSLRENVWAALKKGLLFYGVSDHGPANIGTGVRQEKVYLTIKEEARNLEKEFSKIKILVGAEAN
VISLEGDIDISREIVSALDFLIIGLHPYVLPKTLKDGFLFVLPNLLGRLFSGIKKYLVRVNTRALIRAIEKYRPLVISHP
NLFLPVDLEELAQVCAKYGVALEINTGHNYPKDEIVLAALKTGAKLMVNSDAHYPQTVGELKSGEELLLRYNFPLDRVLN
IKRSELN

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family [H]

Homologues:

Organism=Escherichia coli, GI1787271, Length=256, Percent_Identity=26.953125, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 27701; Mature: 27701

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGDFHTHTRYSDGRGSLRENVWAALKKGLLFYGVSDHGPANIGTGVRQEKVYLTIKEE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHH
ARNLEKEFSKIKILVGAEANVISLEGDIDISREIVSALDFLIIGLHPYVLPKTLKDGFLF
HHHHHHHHHHEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHCCHHH
VLPNLLGRLFSGIKKYLVRVNTRALIRAIEKYRPLVISHPNLFLPVDLEELAQVCAKYGV
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHCCC
ALEINTGHNYPKDEIVLAALKTGAKLMVNSDAHYPQTVGELKSGEELLLRYNFPLDRVLN
EEEEECCCCCCHHHEEEEEHHCCCEEEEECCCCCCHHHHHHCCCCEEEEEECCCHHHHHC
IKRSELN
CHHHCCC
>Mature Secondary Structure
MFSGDFHTHTRYSDGRGSLRENVWAALKKGLLFYGVSDHGPANIGTGVRQEKVYLTIKEE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHH
ARNLEKEFSKIKILVGAEANVISLEGDIDISREIVSALDFLIIGLHPYVLPKTLKDGFLF
HHHHHHHHHHEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHCCHHH
VLPNLLGRLFSGIKKYLVRVNTRALIRAIEKYRPLVISHPNLFLPVDLEELAQVCAKYGV
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHCCC
ALEINTGHNYPKDEIVLAALKTGAKLMVNSDAHYPQTVGELKSGEELLLRYNFPLDRVLN
EEEEECCCCCCHHHEEEEEHHCCCEEEEECCCCCCHHHHHHCCCCEEEEEECCCHHHHHC
IKRSELN
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA