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The map label for this gene is 78045174

Identifier: 78045174

GI number: 78045174

Start: 217349

End: 217807

Strand: Direct

Name: 78045174

Synonym: CHY_0253

Alternate gene names: NA

Gene position: 217349-217807 (Clockwise)

Preceding gene: 78044499

Following gene: 78042633

Centisome position: 9.05

GC content: 49.24

Gene sequence:

>459_bases
ATGAAAATCGAGCAAAAGTTAAATGAGATGGGTATGTCGCTTCCGCCGGCGCCAGCACCGGTTGCTGCTTACGTGCCGGG
GGTATTAATTGATAACTATATTTATGTTTCCGGACAGCTTCCCTTTGAAGGAGGGGAATTAAAAACCAGAGGTAAGTTGG
GAGCGGAAGTTACGGTAGAAGAAGGGATGCGTCTTGCCAAAGTGGCAGCTCTTAACTGCCTAGCGGTGGTCAAGGGGCTT
ATAGGGGACCTCGACCGGATTGAAAAAATCATTAAGGTTACCGGTTATGTAGCAAGTAGCCCGGGCTTTAACGACCAGCC
CAAAGTAATAAATGGCGCTTCGGAGTTTTTGGCAGAATTACTGGGGGATGCAGGAAAACACGCCCGGGCGGCGGTAGGGG
TCAACGAACTACCCCTCAATTCTCCGGTAGAAGTGGAGATGATTGTTAAGGTACGTTAA

Upstream 100 bases:

>100_bases
ACTATTTGGTATGAGCGTTTCCGAGCTTAAAGAATTATCCGGAGAAAAACTGATAAACTAAATTAAGGGAATTCTTTCTA
AAAGTAAAGGAGGTAGTTGG

Downstream 100 bases:

>100_bases
AAATCTATGGTAAAATAAGCATAGGGTTTAGGGGAGTTTTGGGTTAATAATTTTAAACCCGAAAGCTCCCCTAAAGCTAT
ATATGGAACTGTTTTCCTGA

Product: endoribonuclease L-PSP family protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Endoribonuclease L-Psp; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; L-PSP Family Endoribonuclease; Transcriptional Regulator; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; YjgF Family Translation Initiation Inhibitor; 2-Aminomuconate Deaminase; YjgF-Family Protein; Endoribonuclease-L-PSP Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKIEQKLNEMGMSLPPAPAPVAAYVPGVLIDNYIYVSGQLPFEGGELKTRGKLGAEVTVEEGMRLAKVAALNCLAVVKGL
IGDLDRIEKIIKVTGYVASSPGFNDQPKVINGASEFLAELLGDAGKHARAAVGVNELPLNSPVEVEMIVKVR

Sequences:

>Translated_152_residues
MKIEQKLNEMGMSLPPAPAPVAAYVPGVLIDNYIYVSGQLPFEGGELKTRGKLGAEVTVEEGMRLAKVAALNCLAVVKGL
IGDLDRIEKIIKVTGYVASSPGFNDQPKVINGASEFLAELLGDAGKHARAAVGVNELPLNSPVEVEMIVKVR
>Mature_152_residues
MKIEQKLNEMGMSLPPAPAPVAAYVPGVLIDNYIYVSGQLPFEGGELKTRGKLGAEVTVEEGMRLAKVAALNCLAVVKGL
IGDLDRIEKIIKVTGYVASSPGFNDQPKVINGASEFLAELLGDAGKHARAAVGVNELPLNSPVEVEMIVKVR

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16097; Mature: 16097

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEQKLNEMGMSLPPAPAPVAAYVPGVLIDNYIYVSGQLPFEGGELKTRGKLGAEVTVE
CCHHHHHHHCCCCCCCCCCCHHHHHCHHEECCEEEEECCCCCCCCCEEECCCCCCEEEHH
EGMRLAKVAALNCLAVVKGLIGDLDRIEKIIKVTGYVASSPGFNDQPKVINGASEFLAEL
HCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCEECCHHHHHHHH
LGDAGKHARAAVGVNELPLNSPVEVEMIVKVR
HCCCCCCHHHHCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKIEQKLNEMGMSLPPAPAPVAAYVPGVLIDNYIYVSGQLPFEGGELKTRGKLGAEVTVE
CCHHHHHHHCCCCCCCCCCCHHHHHCHHEECCEEEEECCCCCCCCCEEECCCCCCEEEHH
EGMRLAKVAALNCLAVVKGLIGDLDRIEKIIKVTGYVASSPGFNDQPKVINGASEFLAEL
HCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCEECCHHHHHHHH
LGDAGKHARAAVGVNELPLNSPVEVEMIVKVR
HCCCCCCHHHHCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA