| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78045115
Identifier: 78045115
GI number: 78045115
Start: 794112
End: 794738
Strand: Direct
Name: 78045115
Synonym: CHY_0899
Alternate gene names: NA
Gene position: 794112-794738 (Clockwise)
Preceding gene: 78043655
Following gene: 78044743
Centisome position: 33.07
GC content: 30.14
Gene sequence:
>627_bases TTGGCTATGGAATTTCCATGGGCTAAACTTTTTAAATTAGCGGTAGACTTTTTAAATGATTCCTTAATTCCTACTACTGA TTGGACTTTTGGGGGAGGAAGTGCCCTATTTTATTATTTTTATCACCGGGAAAGTAAAGATGTTGATATTTTTTTAACCG ATGCTCAGTATCTAACTTGGCTTACTCCAAGACTAAACAGTTTAATTGCTAAAAGCACTGAAGATTATGTGGAAAGTGCA AATTTTTTAAAATTACAACTAACTGATGGGGAAATTGATTTTATCATAGCTCCATATTTTACTGCCGACCCATATAAAAA AATTAATTTACTTGGAAAAGAAATTCAAATCGAAACCCCATGGGAAATTGTTTTAAAAAAACTTTTTTATCGGGCGCAAA GCTTAAAAGTAAGGGATATTGTTGATGTTGCCGTGGTATATAAAAATCATAGGGAAACGCTTGTTAGATATGCAAAAGGG CTTGGCAAGAAAAAAGAAATTATTGAAAAAAGGTTTCAAAATTTAATAGAAATTTATCCCAAAGAAATTGAAAATTTAAA GATTTTGGATGAAAGTTTAAAAGTTGACGCGTTAAATATTTTAAAAAAATTTCTGCGAGAAATTTAA
Upstream 100 bases:
>100_bases CGCTTTTTAATTAAACATAACCTTACAGAGAAACAGCTTTTAAATTACTACCGGATGTTTGTAAAAAAGTATTATCCCAA TCCTGAATTTGAGGAGACTT
Downstream 100 bases:
>100_bases ATCCTGGAGGAATAAAAATGGCGGTTATTGAGGTAACCGGACTTACCAAGCGCTTTAAAGAGGTTGAAGCGGTGAAAGGG GTGGACCTTACCGTTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAMEFPWAKLFKLAVDFLNDSLIPTTDWTFGGGSALFYYFYHRESKDVDIFLTDAQYLTWLTPRLNSLIAKSTEDYVESA NFLKLQLTDGEIDFIIAPYFTADPYKKINLLGKEIQIETPWEIVLKKLFYRAQSLKVRDIVDVAVVYKNHRETLVRYAKG LGKKKEIIEKRFQNLIEIYPKEIENLKILDESLKVDALNILKKFLREI
Sequences:
>Translated_208_residues MAMEFPWAKLFKLAVDFLNDSLIPTTDWTFGGGSALFYYFYHRESKDVDIFLTDAQYLTWLTPRLNSLIAKSTEDYVESA NFLKLQLTDGEIDFIIAPYFTADPYKKINLLGKEIQIETPWEIVLKKLFYRAQSLKVRDIVDVAVVYKNHRETLVRYAKG LGKKKEIIEKRFQNLIEIYPKEIENLKILDESLKVDALNILKKFLREI >Mature_207_residues AMEFPWAKLFKLAVDFLNDSLIPTTDWTFGGGSALFYYFYHRESKDVDIFLTDAQYLTWLTPRLNSLIAKSTEDYVESAN FLKLQLTDGEIDFIIAPYFTADPYKKINLLGKEIQIETPWEIVLKKLFYRAQSLKVRDIVDVAVVYKNHRETLVRYAKGL GKKKEIIEKRFQNLIEIYPKEIENLKILDESLKVDALNILKKFLREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24416; Mature: 24284
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMEFPWAKLFKLAVDFLNDSLIPTTDWTFGGGSALFYYFYHRESKDVDIFLTDAQYLTW CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCHHHHH LTPRLNSLIAKSTEDYVESANFLKLQLTDGEIDFIIAPYFTADPYKKINLLGKEIQIETP HHHHHHHHHHHCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHCCCEEEECCC WEIVLKKLFYRAQSLKVRDIVDVAVVYKNHRETLVRYAKGLGKKKEIIEKRFQNLIEIYP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KEIENLKILDESLKVDALNILKKFLREI HHHHHHHHHHHHHCHHHHHHHHHHHHHC >Mature Secondary Structure AMEFPWAKLFKLAVDFLNDSLIPTTDWTFGGGSALFYYFYHRESKDVDIFLTDAQYLTW CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCHHHHH LTPRLNSLIAKSTEDYVESANFLKLQLTDGEIDFIIAPYFTADPYKKINLLGKEIQIETP HHHHHHHHHHHCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHCCCEEEECCC WEIVLKKLFYRAQSLKVRDIVDVAVVYKNHRETLVRYAKGLGKKKEIIEKRFQNLIEIYP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KEIENLKILDESLKVDALNILKKFLREI HHHHHHHHHHHHHCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA