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The map label for this gene is 78044945

Identifier: 78044945

GI number: 78044945

Start: 150424

End: 151020

Strand: Direct

Name: 78044945

Synonym: CHY_0179

Alternate gene names: NA

Gene position: 150424-151020 (Clockwise)

Preceding gene: 78043580

Following gene: 78044385

Centisome position: 6.26

GC content: 45.9

Gene sequence:

>597_bases
ATGGAGGAACTTAAAGCATTAAAAGAAGAGGCGTTGGCCTGTCAGCGTTGCAATCTTAGAGCCCATGCCCAAAGGGTTGT
GTTTGGGGAGGGAAATGAAAAAGCCCTATTAATGTTAGTGGGGGAAGGACCCGGAGCTGAAGAAGACCGGCAAGGCAGAC
CTTTTGTGGGGGCTGCCGGGGAACTTTTAAATAAAATCTTAGAAGCCGCAGGGATTTCCCGGGAAGAAGTTTACATTGGC
AATGTGGTAAAATGTCGTCCCCCCAATAACCGGGTTCCTACCAGAGAAGAAGTGGCTGCTTGCCGAACTTTTTTAGACCG
GCAAATTGAGTTAATTAAACCTAAAATTATTGTTTGCCTTGGGGCAACTGCTGCCCAGACGTTGATTGGGCCGGATGTTA
GAATTACCAAAATTCGCGGGCTCTGGCATGAAAAAGGTGAGATAAAGATAATGCCGACATTTCACCCGGCAGCGCTTTTA
CGGGATCCGACGAAAAAACGCCCGGCGTGGGAAGATTTTCAAAAAGTCCGGGATTTATACTTTGCTTTGAAAAAAGAGCA
GGAAGTGGAGGAGTTTGAACAATTAAAATTGTTTTAA

Upstream 100 bases:

>100_bases
TATTACTGGAAAATATTTTTGGCCAGAGAAAAGTTATTAAAGCAAAAATAAAGCGTTTGGAGCTGGTAGACCATCGTATA
TTACTGGAGCGGGAGGATTA

Downstream 100 bases:

>100_bases
AAAAGTAACATTAAGCCCCTGACCTCGTTTCAGGTAAGGTCAAGGGCTTATTTATTTTATATTAGTTTCCTATAGTTCTT
TTAACTTTTTTAGCTCTTCC

Product: uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage DNA Polymerase; DNA Glycosylase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAGELLNKILEAAGISREEVYIG
NVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCLGATAAQTLIGPDVRITKIRGLWHEKGEIKIMPTFHPAALL
RDPTKKRPAWEDFQKVRDLYFALKKEQEVEEFEQLKLF

Sequences:

>Translated_198_residues
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAGELLNKILEAAGISREEVYIG
NVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCLGATAAQTLIGPDVRITKIRGLWHEKGEIKIMPTFHPAALL
RDPTKKRPAWEDFQKVRDLYFALKKEQEVEEFEQLKLF
>Mature_198_residues
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAGELLNKILEAAGISREEVYIG
NVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCLGATAAQTLIGPDVRITKIRGLWHEKGEIKIMPTFHPAALL
RDPTKKRPAWEDFQKVRDLYFALKKEQEVEEFEQLKLF

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22370; Mature: 22370

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAG
CHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHH
ELLNKILEAAGISREEVYIGNVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCL
HHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
GATAAQTLIGPDVRITKIRGLWHEKGEIKIMPTFHPAALLRDPTKKRPAWEDFQKVRDLY
CCHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHH
FALKKEQEVEEFEQLKLF
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAG
CHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHH
ELLNKILEAAGISREEVYIGNVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCL
HHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
GATAAQTLIGPDVRITKIRGLWHEKGEIKIMPTFHPAALLRDPTKKRPAWEDFQKVRDLY
CCHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHH
FALKKEQEVEEFEQLKLF
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA