Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044933

Identifier: 78044933

GI number: 78044933

Start: 2250187

End: 2250711

Strand: Direct

Name: 78044933

Synonym: CHY_2517

Alternate gene names: NA

Gene position: 2250187-2250711 (Clockwise)

Preceding gene: 78043020

Following gene: 78043439

Centisome position: 93.7

GC content: 39.05

Gene sequence:

>525_bases
TTGATGATTTTTTATGATTTTGGCTTATCTGTCCGGGAATATGCCCGGCGGGGCAAAAAGAATGATTTTCCCGATGTTGA
CATTTGCCCACATTGTAAAGGGCATATTAGACTGTTACGGCATGGGTTTTATTTTAGATACGCCGTCACTAATAATAACG
TTTTTTCCATCCCTATTTGCCGTTTAAGATGTCCTTCCTGTGGTAAAACCGTCTCAATTATCCCTTCTTTCTTACTTCCG
TACTTTCAGCATACTGTGGCTACTATTTTGATAAAACTTAAACATTACTTCCTTTATCGAAAAGTCATAGGTTATCGTCA
GTTATTGGAGTTTTTTAATCAAAGGTTTAGGAAAAATCTAACCCGTATCGAGATGTTTTTCCGAGATGTCGGCTTTAGGG
GCGTTTTTCCTTTTAACCCAAAAGAAAAAGCCATAAAGTTGGTGGAAATGCTCCTGGCTTTGGGCAAAACTCCCCTCCTG
AAAAGGGGCATCGGACATTTCCCACTTAACTTTATGGCAAGTTAA

Upstream 100 bases:

>100_bases
TCAAATCCCCAGAAATTTTTCAAAATAAAACAGCGGCTTAACCTTTTTAGACCACAAATATTTTGCTATAATTTTTGCAA
AATATTTGGGGTGATTTATT

Downstream 100 bases:

>100_bases
TTCTATCATTTTTTCTCCCTCCTGAAAACTATTTTTTGCTTCCACAAACCTTTTGCGTGGTATTCTTTTTCCTCCCAGGT
TAAAATGGTCTCATGGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MMIFYDFGLSVREYARRGKKNDFPDVDICPHCKGHIRLLRHGFYFRYAVTNNNVFSIPICRLRCPSCGKTVSIIPSFLLP
YFQHTVATILIKLKHYFLYRKVIGYRQLLEFFNQRFRKNLTRIEMFFRDVGFRGVFPFNPKEKAIKLVEMLLALGKTPLL
KRGIGHFPLNFMAS

Sequences:

>Translated_174_residues
MMIFYDFGLSVREYARRGKKNDFPDVDICPHCKGHIRLLRHGFYFRYAVTNNNVFSIPICRLRCPSCGKTVSIIPSFLLP
YFQHTVATILIKLKHYFLYRKVIGYRQLLEFFNQRFRKNLTRIEMFFRDVGFRGVFPFNPKEKAIKLVEMLLALGKTPLL
KRGIGHFPLNFMAS
>Mature_174_residues
MMIFYDFGLSVREYARRGKKNDFPDVDICPHCKGHIRLLRHGFYFRYAVTNNNVFSIPICRLRCPSCGKTVSIIPSFLLP
YFQHTVATILIKLKHYFLYRKVIGYRQLLEFFNQRFRKNLTRIEMFFRDVGFRGVFPFNPKEKAIKLVEMLLALGKTPLL
KRGIGHFPLNFMAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20565; Mature: 20565

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIFYDFGLSVREYARRGKKNDFPDVDICPHCKGHIRLLRHGFYFRYAVTNNNVFSIPIC
CEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCEEEEEEH
RLRCPSCGKTVSIIPSFLLPYFQHTVATILIKLKHYFLYRKVIGYRQLLEFFNQRFRKNL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRIEMFFRDVGFRGVFPFNPKEKAIKLVEMLLALGKTPLLKRGIGHFPLNFMAS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MMIFYDFGLSVREYARRGKKNDFPDVDICPHCKGHIRLLRHGFYFRYAVTNNNVFSIPIC
CEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCEEEEEEH
RLRCPSCGKTVSIIPSFLLPYFQHTVATILIKLKHYFLYRKVIGYRQLLEFFNQRFRKNL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRIEMFFRDVGFRGVFPFNPKEKAIKLVEMLLALGKTPLLKRGIGHFPLNFMAS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA