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The map label for this gene is pduB [H]

Identifier: 78044901

GI number: 78044901

Start: 598007

End: 598957

Strand: Direct

Name: pduB [H]

Synonym: CHY_0683

Alternate gene names: 78044901

Gene position: 598007-598957 (Clockwise)

Preceding gene: 78044315

Following gene: 78042706

Centisome position: 24.9

GC content: 47.53

Gene sequence:

>951_bases
GTGTCTGAGGTTTTAAATCGGCAGAGCCGAGAAATTACTACGATTGTTAGCCAACCTAATATAAGCCGTCCCAATTATCA
GCGGGAAAAAGGAAAGGAACGGCTTTTAGGAATTAAAGCAACGGAAAGTAGCAATAAAGCAGGTCAATCCTTTGTTCCTC
AGTTAAATCCCAGCGGAACCCTTTTTACCATTTCCATGAAACCACCGGCGAAAATTAATACTGGATACACGCCCGTGGAC
GAGCAAAAAGAAGTTAAAGCTGAAGTTAGGAATTCGGAAATTACGGAGAAAAGTTTTGGGCAAGCAAAATTTATCGGGGT
TTCGGCGGGAAACACCGTTGGTTACGTAATTCCCAATCTTGAACCGGGGCTTAGCCAATACCTCCAGGCTAACAGAAGCT
TAAGAGCTATTGGGGTAATTAGCTCCCGGGTTGGGGCTGCGGCGCAAATCATGGCAGCCGATGAAGCGGTCAAGAAGACC
AATTCCGAATTAATTCGGTTAGAGCTTGCCCGTGATGAATTAGGTGGTCCGGGACATGGAGTATTTGCCCTTTTTGGGGC
AGAAGATGTGGCAGATGTTATCCGGGCAGTGGAAATTGCCCTCAAGGCCACGGAAGAGTACTACCAGAACATAAAAAATA
CGCCGGCAGGAAAAATTGAAACCCATTACACGGCTCGCGCAGCGGCAGCATTAAACAAGGCTTTTGGGGCGCCGTTAAAT
CAGGCCTTTGGCATTATTATAGGGGCTCCGGCAGGGGTAGGATTATTGATGAGTGATACCGCCTTAAAAACTGCCCATGT
GACCATGGTATCGTTCTGGGGGCCCTCGGTAGTTCAGGCTTTTGCCAACGAGGTATGGTTTACAGTAACCGGCGATTCAG
CAGCGGTTAAAAATGCCTTAGAAGCAGCTCGGGAAGTTGGATTGCAGGTTTTGGCGGAATTTAGGGCTTAA

Upstream 100 bases:

>100_bases
TATCCTTTAACGTTATCCCCAGACCCCATGAAGAAATGCTGAAGGTTATACCCGTGATATAAAGGGGTGAAAAAGTTTGG
AAAACCTTGTAGATAAAATT

Downstream 100 bases:

>100_bases
AGGAGGTTTATTCGATGAATAAAGCCCTTGGTCTAATTGAAGCAATTGGTTACTCTACCGCTATGACGGCTTTAGATGCT
GCTGTAAAAGCTGCCAACGT

Product: putative propanediol utilization protein pduB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSEVLNRQSREITTIVSQPNISRPNYQREKGKERLLGIKATESSNKAGQSFVPQLNPSGTLFTISMKPPAKINTGYTPVD
EQKEVKAEVRNSEITEKSFGQAKFIGVSAGNTVGYVIPNLEPGLSQYLQANRSLRAIGVISSRVGAAAQIMAADEAVKKT
NSELIRLELARDELGGPGHGVFALFGAEDVADVIRAVEIALKATEEYYQNIKNTPAGKIETHYTARAAAALNKAFGAPLN
QAFGIIIGAPAGVGLLMSDTALKTAHVTMVSFWGPSVVQAFANEVWFTVTGDSAAVKNALEAAREVGLQVLAEFRA

Sequences:

>Translated_316_residues
MSEVLNRQSREITTIVSQPNISRPNYQREKGKERLLGIKATESSNKAGQSFVPQLNPSGTLFTISMKPPAKINTGYTPVD
EQKEVKAEVRNSEITEKSFGQAKFIGVSAGNTVGYVIPNLEPGLSQYLQANRSLRAIGVISSRVGAAAQIMAADEAVKKT
NSELIRLELARDELGGPGHGVFALFGAEDVADVIRAVEIALKATEEYYQNIKNTPAGKIETHYTARAAAALNKAFGAPLN
QAFGIIIGAPAGVGLLMSDTALKTAHVTMVSFWGPSVVQAFANEVWFTVTGDSAAVKNALEAAREVGLQVLAEFRA
>Mature_315_residues
SEVLNRQSREITTIVSQPNISRPNYQREKGKERLLGIKATESSNKAGQSFVPQLNPSGTLFTISMKPPAKINTGYTPVDE
QKEVKAEVRNSEITEKSFGQAKFIGVSAGNTVGYVIPNLEPGLSQYLQANRSLRAIGVISSRVGAAAQIMAADEAVKKTN
SELIRLELARDELGGPGHGVFALFGAEDVADVIRAVEIALKATEEYYQNIKNTPAGKIETHYTARAAAALNKAFGAPLNQ
AFGIIIGAPAGVGLLMSDTALKTAHVTMVSFWGPSVVQAFANEVWFTVTGDSAAVKNALEAAREVGLQVLAEFRA

Specific function: Unknown

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 33747; Mature: 33616

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVLNRQSREITTIVSQPNISRPNYQREKGKERLLGIKATESSNKAGQSFVPQLNPSGT
CCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
LFTISMKPPAKINTGYTPVDEQKEVKAEVRNSEITEKSFGQAKFIGVSAGNTVGYVIPNL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCEEEEEECCC
EPGLSQYLQANRSLRAIGVISSRVGAAAQIMAADEAVKKTNSELIRLELARDELGGPGHG
CHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCC
VFALFGAEDVADVIRAVEIALKATEEYYQNIKNTPAGKIETHYTARAAAALNKAFGAPLN
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCH
QAFGIIIGAPAGVGLLMSDTALKTAHVTMVSFWGPSVVQAFANEVWFTVTGDSAAVKNAL
HCCEEEEECCCCCCEEEECCHHHHEEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH
EAAREVGLQVLAEFRA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEVLNRQSREITTIVSQPNISRPNYQREKGKERLLGIKATESSNKAGQSFVPQLNPSGT
CHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
LFTISMKPPAKINTGYTPVDEQKEVKAEVRNSEITEKSFGQAKFIGVSAGNTVGYVIPNL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCEEEEEECCC
EPGLSQYLQANRSLRAIGVISSRVGAAAQIMAADEAVKKTNSELIRLELARDELGGPGHG
CHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCC
VFALFGAEDVADVIRAVEIALKATEEYYQNIKNTPAGKIETHYTARAAAALNKAFGAPLN
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCH
QAFGIIIGAPAGVGLLMSDTALKTAHVTMVSFWGPSVVQAFANEVWFTVTGDSAAVKNAL
HCCEEEEECCCCCCEEEECCHHHHEEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH
EAAREVGLQVLAEFRA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]