| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is cobK [H]
Identifier: 78044761
GI number: 78044761
Start: 673445
End: 674221
Strand: Direct
Name: cobK [H]
Synonym: CHY_0765
Alternate gene names: 78044761
Gene position: 673445-674221 (Clockwise)
Preceding gene: 78042730
Following gene: 78042873
Centisome position: 28.04
GC content: 40.8
Gene sequence:
>777_bases GTGATTTTATTGCTGGGAGGTACCAGTGAAAGTATTTTAATTGCCGATTTGCTCGAAAAAAAAGGTTTACCTTTTATTTT ATCGGTGGCGTCAAATTTGGGCCTTATGCGGTTTAAAAAATATGAAAAACCTTTGCGGGCTGGAGTCCTGGATTTTCATG GCCTTCTGGAGTTTGTTCAGAAAAATGGGATAAAGTTAATAATTGATGCTACCCATCCCTTTGCTAAAAATGCCAGTGAA AATGCTATCAGGGCGGCCCAGGTATTAAATATACCCTATATCAGGTTTGAGCGCCCCAGGGATGAATTAAAAAATTCCCT TATCATAGAGGCCATTGATTTAGAAGCTGCACTAAGAGAACTGCCGCAACTTGGTAAGCGTCCATTAATAACTGTGGGAG TAAAAATGCTTCCGGAAATCATCAGAAAAAGTGCTGTTTTAGGGCAAAAGCCGGTAGTCAAAGTTTTGCCCCTAACGGAT AATTTTACCCTTTTGGATGGTTTAGGAATTCCTCTCGAGGACCGGCTTTCCTTTTGGGGTCCAGGAAGCCGGGAGCTTAT TTCTCAGCTAATTAAATTTTATTCCCTGACCGGTCTTTTGACCAAAGAAAGCGGTGATTTAGGAGGAGAAAGGGAAAAGG TAGAAAGCTTTTTAAGTCAGAGTTTACCGGTAATTTTAATAAAACGTCCTGAGGTTTTTTACCCTCAATCGGTATCCACA CTGGACCGGTTGGAAGAAATTTTAACATTGGAGGCGGAAAAATGGAAAAAGCAGTAG
Upstream 100 bases:
>100_bases TTACCGAAGAGGATGCCGATATGCGCACGGTAATAATTATCGGAAATAGCCAGAGCTATTTTTATGAAAACTTTATTATT ACACCCCGGGGGTATAAGTG
Downstream 100 bases:
>100_bases TTTTGCTGGCTCACGGTTCCCGGGTGGCGCAAGCGGTGGAGAAATTTCGCGAAGTGGTAGGAAAGTTAAGGGAGCGCTTT CCCTTCCGGCTCGAGGAGGC
Product: precorrin-6x reductase
Products: Precorrin 6A; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MILLLGGTSESILIADLLEKKGLPFILSVASNLGLMRFKKYEKPLRAGVLDFHGLLEFVQKNGIKLIIDATHPFAKNASE NAIRAAQVLNIPYIRFERPRDELKNSLIIEAIDLEAALRELPQLGKRPLITVGVKMLPEIIRKSAVLGQKPVVKVLPLTD NFTLLDGLGIPLEDRLSFWGPGSRELISQLIKFYSLTGLLTKESGDLGGEREKVESFLSQSLPVILIKRPEVFYPQSVST LDRLEEILTLEAEKWKKQ
Sequences:
>Translated_258_residues MILLLGGTSESILIADLLEKKGLPFILSVASNLGLMRFKKYEKPLRAGVLDFHGLLEFVQKNGIKLIIDATHPFAKNASE NAIRAAQVLNIPYIRFERPRDELKNSLIIEAIDLEAALRELPQLGKRPLITVGVKMLPEIIRKSAVLGQKPVVKVLPLTD NFTLLDGLGIPLEDRLSFWGPGSRELISQLIKFYSLTGLLTKESGDLGGEREKVESFLSQSLPVILIKRPEVFYPQSVST LDRLEEILTLEAEKWKKQ >Mature_258_residues MILLLGGTSESILIADLLEKKGLPFILSVASNLGLMRFKKYEKPLRAGVLDFHGLLEFVQKNGIKLIIDATHPFAKNASE NAIRAAQVLNIPYIRFERPRDELKNSLIIEAIDLEAALRELPQLGKRPLITVGVKMLPEIIRKSAVLGQKPVVKVLPLTD NFTLLDGLGIPLEDRLSFWGPGSRELISQLIKFYSLTGLLTKESGDLGGEREKVESFLSQSLPVILIKRPEVFYPQSVST LDRLEEILTLEAEKWKKQ
Specific function: Catalyzes the reduction of the macrocycle of cobalt- precorrin-6X into cobalt-precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: 1.3.1.54
Molecular weight: Translated: 28862; Mature: 28862
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLLGGTSESILIADLLEKKGLPFILSVASNLGLMRFKKYEKPLRAGVLDFHGLLEFVQ CEEEEECCCCHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KNGIKLIIDATHPFAKNASENAIRAAQVLNIPYIRFERPRDELKNSLIIEAIDLEAALRE HCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCEEEEHHHHHHHHH LPQLGKRPLITVGVKMLPEIIRKSAVLGQKPVVKVLPLTDNFTLLDGLGIPLEDRLSFWG HHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHCCCC PGSRELISQLIKFYSLTGLLTKESGDLGGEREKVESFLSQSLPVILIKRPEVFYPQSVST CCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCEECCCCHHH LDRLEEILTLEAEKWKKQ HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILLLGGTSESILIADLLEKKGLPFILSVASNLGLMRFKKYEKPLRAGVLDFHGLLEFVQ CEEEEECCCCHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KNGIKLIIDATHPFAKNASENAIRAAQVLNIPYIRFERPRDELKNSLIIEAIDLEAALRE HCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCEEEEHHHHHHHHH LPQLGKRPLITVGVKMLPEIIRKSAVLGQKPVVKVLPLTDNFTLLDGLGIPLEDRLSFWG HHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHCCCC PGSRELISQLIKFYSLTGLLTKESGDLGGEREKVESFLSQSLPVILIKRPEVFYPQSVST CCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCEECCCCHHH LDRLEEILTLEAEKWKKQ HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Precorrin 6B; NADP+
Specific reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]