Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78044642

Identifier: 78044642

GI number: 78044642

Start: 732490

End: 732612

Strand: Direct

Name: 78044642

Synonym: CHY_0827

Alternate gene names: NA

Gene position: 732490-732612 (Clockwise)

Preceding gene: 78045009

Following gene: 78044169

Centisome position: 30.5

GC content: 43.09

Gene sequence:

>123_bases
GTGGCAGCAAGGAAAAATTTTAGTACCGAAGAGACACTGGCTATCATAGCAGAAGCCGAAAAGCTCTTTTGTTACCAAAA
TTGCAGTGTGCCGCAAATATGGGACTGTCAAAAGCACCATTGA

Upstream 100 bases:

>100_bases
ATCAGTTGTTGAAGACGCCGCTTTCGCCTTTTTTTGCTCCTTAAATGGAATGGACAAAAATGTACGACATGATAACGTTA
ACTAGATAGGGCAGAGTGAG

Downstream 100 bases:

>100_bases
GTACTGGAAGAAGCATTTTCTTGAATTAATAACGGTAATGATTTATCATCGGAACTGGCTAACTTGAGAATAGAGAAAGT
AATGCTTTGCTCCATCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MAARKNFSTEETLAIIAEAEKLFCYQNCSVPQIWDCQKHH

Sequences:

>Translated_40_residues
MAARKNFSTEETLAIIAEAEKLFCYQNCSVPQIWDCQKHH
>Mature_39_residues
AARKNFSTEETLAIIAEAEKLFCYQNCSVPQIWDCQKHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4655; Mature: 4524

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKNFSTEETLAIIAEAEKLFCYQNCSVPQIWDCQKHH
CCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AARKNFSTEETLAIIAEAEKLFCYQNCSVPQIWDCQKHH
CCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA