| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78044635
Identifier: 78044635
GI number: 78044635
Start: 600503
End: 601264
Strand: Direct
Name: 78044635
Synonym: CHY_0687
Alternate gene names: NA
Gene position: 600503-601264 (Clockwise)
Preceding gene: 78044167
Following gene: 78045187
Centisome position: 25.01
GC content: 39.9
Gene sequence:
>762_bases ATGTCCATTTATCTTACTGCAATGAAAAACTATTTGGAGCAGCAAAATAGCTTAAACAGTTCAAAGCCAAAAGCACTAAT TTTGGTTGCTGGAGCGACCGGTGGGGCGCAAGAAGGCTTTCAAGCTTTAGAACGTTTAAGGGAAAGCTATGAAATAATAG TTGTAGCCAGTCAAGCGGCTTTGGATCTTTACGGTGAAGAAAATCTTAAATCCCTTACCGGAACAGCAAAAATCTACCAG GGTAAGGAGTTTAAAATTTATGACTTTTTAAAAGTTGTGACCATAGTGTTTTTACCGGTGGTGTCTTCCAACCTGGTGGG CAAGTTAGCCCATGGCATTTATGATGAACCGTTAGCTTCCTTAATTTTTCATGCCAAGCTTGCGGGCAAACCGGTTATAG GTGTTGTGGATGGAGCTTTACCCGATGGTGATGGCTTTAAAAGCCGGGGATTTACCAATCCCCCTCCGGGTCTGGTAAAG CTTATTAATGAAAATATCGAAAAACTACGGGCCCAGGAGATCTATCTCTATAAAGGTAAAACGATTTTAGAAAAGCTTTC TCCCTACCTTGGACCGCAAACAGCAGAAACTTCTGTTGTTTCATCAAAGACGGGAGTTACTTTAAATAAACGGGTTATTA CCCGAGAAGATCTTTTAGAACTTGCCAATCAAACTATTACTGTGTCACAAAAAACAATTATTACCGACCTTGCCCGGGAA TATGCTGTCCAAAATAATATAAAAATTAATTTTGCTGAATAG
Upstream 100 bases:
>100_bases GAAGAGTTTTCCAGATTTCTTGGAAAAGAGGTACAGGTACCTATCCATCCGCTGTTGGTAACCCCTTTAGGGATTGCGCT TTTTGGATAGGGGTGAAAAA
Downstream 100 bases:
>100_bases GCGGTGAGGGGATGTTACTGGGAAAAGTTATTGGTAACGTAGTTGCCACGCGGAAAGATGAAACATTGGTCGGGACAAAA ATGCTCATTACCCTGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSIYLTAMKNYLEQQNSLNSSKPKALILVAGATGGAQEGFQALERLRESYEIIVVASQAALDLYGEENLKSLTGTAKIYQ GKEFKIYDFLKVVTIVFLPVVSSNLVGKLAHGIYDEPLASLIFHAKLAGKPVIGVVDGALPDGDGFKSRGFTNPPPGLVK LINENIEKLRAQEIYLYKGKTILEKLSPYLGPQTAETSVVSSKTGVTLNKRVITREDLLELANQTITVSQKTIITDLARE YAVQNNIKINFAE
Sequences:
>Translated_253_residues MSIYLTAMKNYLEQQNSLNSSKPKALILVAGATGGAQEGFQALERLRESYEIIVVASQAALDLYGEENLKSLTGTAKIYQ GKEFKIYDFLKVVTIVFLPVVSSNLVGKLAHGIYDEPLASLIFHAKLAGKPVIGVVDGALPDGDGFKSRGFTNPPPGLVK LINENIEKLRAQEIYLYKGKTILEKLSPYLGPQTAETSVVSSKTGVTLNKRVITREDLLELANQTITVSQKTIITDLARE YAVQNNIKINFAE >Mature_252_residues SIYLTAMKNYLEQQNSLNSSKPKALILVAGATGGAQEGFQALERLRESYEIIVVASQAALDLYGEENLKSLTGTAKIYQG KEFKIYDFLKVVTIVFLPVVSSNLVGKLAHGIYDEPLASLIFHAKLAGKPVIGVVDGALPDGDGFKSRGFTNPPPGLVKL INENIEKLRAQEIYLYKGKTILEKLSPYLGPQTAETSVVSSKTGVTLNKRVITREDLLELANQTITVSQKTIITDLAREY AVQNNIKINFAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27663; Mature: 27532
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYLTAMKNYLEQQNSLNSSKPKALILVAGATGGAQEGFQALERLRESYEIIVVASQAA CEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH LDLYGEENLKSLTGTAKIYQGKEFKIYDFLKVVTIVFLPVVSSNLVGKLAHGIYDEPLAS HHHCCCHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LIFHAKLAGKPVIGVVDGALPDGDGFKSRGFTNPPPGLVKLINENIEKLRAQEIYLYKGK HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCH TILEKLSPYLGPQTAETSVVSSKTGVTLNKRVITREDLLELANQTITVSQKTIITDLARE HHHHHHHHHCCCCCCCHHHHCCCCCCEECHHCCCHHHHHHHHCCEEEECHHHHHHHHHHH YAVQNNIKINFAE HHHHCCEEEEECC >Mature Secondary Structure SIYLTAMKNYLEQQNSLNSSKPKALILVAGATGGAQEGFQALERLRESYEIIVVASQAA EEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH LDLYGEENLKSLTGTAKIYQGKEFKIYDFLKVVTIVFLPVVSSNLVGKLAHGIYDEPLAS HHHCCCHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LIFHAKLAGKPVIGVVDGALPDGDGFKSRGFTNPPPGLVKLINENIEKLRAQEIYLYKGK HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCH TILEKLSPYLGPQTAETSVVSSKTGVTLNKRVITREDLLELANQTITVSQKTIITDLARE HHHHHHHHHCCCCCCCHHHHCCCCCCEECHHCCCHHHHHHHHCCEEEECHHHHHHHHHHH YAVQNNIKINFAE HHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA