Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is ydiA [C]

Identifier: 78044534

GI number: 78044534

Start: 386864

End: 387697

Strand: Direct

Name: ydiA [C]

Synonym: CHY_0442

Alternate gene names: 78044534

Gene position: 386864-387697 (Clockwise)

Preceding gene: 78043601

Following gene: 78044221

Centisome position: 16.11

GC content: 46.52

Gene sequence:

>834_bases
TTGGCAATTAATCTGAAGTTAGAGCAAATTCCAGTGGTTTATATTCTTTCTGATTCAATCGGGGAAACGGGGGAAGTGGT
GGCGAAAGCGGCTGCCAGTCAATTTGATTCGGGCCGGGTTGATATTCGGCGGGTGCCGTACTTAAGTTCGGTTCGGGAAG
TGGAAGAGGCGTTACAGGAAGCGGAAAGTGCAGGGGCCTTGGTGGTTTACACTCTGGTGCGCCCGGACTTAAAAGAGTAC
CTGGAAAAGCGAGCCCATGAACTTTCCCTTCCCCATGTGGATATCATGGGACCGATGTTGGAGGGTTTAAAGCAAATCAC
CAAGCAAAATCCTAAATACCAGCCCGGATTAATTCGCAAAATGGATGAAGCTTACTTTAGCAAGGTAGAAGCGATTGAAT
TTGCCGTTAAATACGATGACGGCAAAGAACCTCGGGGATTGCTGCGGGCGGATTTGGTGGTAATTGGGGTTTCGCGAACT
TCTAAAACTCCCCTTTGCATGTATTTGGCCCATAAGGGGATCAAAGCGGCAAACGTGCCGTTAGTACCGGAGGCTACTCC
CCCGGAAGAATTGTTTAAAATTCCCCCTCATAAAGTTGTGGGACTTACCATAAAACCTTCAATTTTATTTGAGATCAGGA
AGGAAAGGCTAAAAACATTGGGACTATCCCAAACGGCCGATTATGCTAACATGGAAAGAATTTTGATGGAGCTGGATTAT
GCTCTGGGTATTATGAAAAAAATCGGCTGTGCCGTAATTGATGTGAGTAATAAAGCGGTGGAGGAAACGGCAGCCAGGGT
GTTAGAAATTTACAGGAAAGGGGTAGGGAGGTAA

Upstream 100 bases:

>100_bases
GCTGCATGAAGGTCGGGAAAAATACCGGGTGGTGGGTAGGTTTACCAAAACCAACATTACAAGGCTTTTTGTCAGCCTGG
CCGGAAAGTAAAAGGAGGTA

Downstream 100 bases:

>100_bases
TGACCAAATACGTTTACTTATTTCATGAAGGCCGCGCTGACATGAAAGATTTATTGGGGGGAAAAGGGGCCAATTTAGCG
GAAATGACCAATATCGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAINLKLEQIPVVYILSDSIGETGEVVAKAAASQFDSGRVDIRRVPYLSSVREVEEALQEAESAGALVVYTLVRPDLKEY
LEKRAHELSLPHVDIMGPMLEGLKQITKQNPKYQPGLIRKMDEAYFSKVEAIEFAVKYDDGKEPRGLLRADLVVIGVSRT
SKTPLCMYLAHKGIKAANVPLVPEATPPEELFKIPPHKVVGLTIKPSILFEIRKERLKTLGLSQTADYANMERILMELDY
ALGIMKKIGCAVIDVSNKAVEETAARVLEIYRKGVGR

Sequences:

>Translated_277_residues
MAINLKLEQIPVVYILSDSIGETGEVVAKAAASQFDSGRVDIRRVPYLSSVREVEEALQEAESAGALVVYTLVRPDLKEY
LEKRAHELSLPHVDIMGPMLEGLKQITKQNPKYQPGLIRKMDEAYFSKVEAIEFAVKYDDGKEPRGLLRADLVVIGVSRT
SKTPLCMYLAHKGIKAANVPLVPEATPPEELFKIPPHKVVGLTIKPSILFEIRKERLKTLGLSQTADYANMERILMELDY
ALGIMKKIGCAVIDVSNKAVEETAARVLEIYRKGVGR
>Mature_276_residues
AINLKLEQIPVVYILSDSIGETGEVVAKAAASQFDSGRVDIRRVPYLSSVREVEEALQEAESAGALVVYTLVRPDLKEYL
EKRAHELSLPHVDIMGPMLEGLKQITKQNPKYQPGLIRKMDEAYFSKVEAIEFAVKYDDGKEPRGLLRADLVVIGVSRTS
KTPLCMYLAHKGIKAANVPLVPEATPPEELFKIPPHKVVGLTIKPSILFEIRKERLKTLGLSQTADYANMERILMELDYA
LGIMKKIGCAVIDVSNKAVEETAARVLEIYRKGVGR

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=29.3040293040293, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y442_CARHZ (Q3AEY1)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_359303.1
- STRING:   Q3AEY1
- GeneID:   3727653
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_0442
- NMPDR:   fig|246194.3.peg.902
- TIGR:   CHY_0442
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   AMEFAVM
- ProtClustDB:   PRK05339
- BioCyc:   CHYD246194:CHY_0442-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30772; Mature: 30641

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINLKLEQIPVVYILSDSIGETGEVVAKAAASQFDSGRVDIRRVPYLSSVREVEEALQE
CEEEEEEHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AESAGALVVYTLVRPDLKEYLEKRAHELSLPHVDIMGPMLEGLKQITKQNPKYQPGLIRK
HHCCCCEEEEEHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
MDEAYFSKVEAIEFAVKYDDGKEPRGLLRADLVVIGVSRTSKTPLCMYLAHKGIKAANVP
HHHHHHHHHHHHHEEEEECCCCCCCHHHEEEEEEEEECCCCCCCEEHHHHHCCCCCCCCC
LVPEATPPEELFKIPPHKVVGLTIKPSILFEIRKERLKTLGLSQTADYANMERILMELDY
CCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ALGIMKKIGCAVIDVSNKAVEETAARVLEIYRKGVGR
HHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AINLKLEQIPVVYILSDSIGETGEVVAKAAASQFDSGRVDIRRVPYLSSVREVEEALQE
EEEEEEHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AESAGALVVYTLVRPDLKEYLEKRAHELSLPHVDIMGPMLEGLKQITKQNPKYQPGLIRK
HHCCCCEEEEEHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
MDEAYFSKVEAIEFAVKYDDGKEPRGLLRADLVVIGVSRTSKTPLCMYLAHKGIKAANVP
HHHHHHHHHHHHHEEEEECCCCCCCHHHEEEEEEEEECCCCCCCEEHHHHHCCCCCCCCC
LVPEATPPEELFKIPPHKVVGLTIKPSILFEIRKERLKTLGLSQTADYANMERILMELDY
CCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ALGIMKKIGCAVIDVSNKAVEETAARVLEIYRKGVGR
HHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA