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The map label for this gene is dedA [H]

Identifier: 78044309

GI number: 78044309

Start: 1632098

End: 1632721

Strand: Direct

Name: dedA [H]

Synonym: CHY_1820

Alternate gene names: 78044309

Gene position: 1632098-1632721 (Clockwise)

Preceding gene: 78042900

Following gene: 78044050

Centisome position: 67.96

GC content: 36.22

Gene sequence:

>624_bases
ATGGGAGCAATCTGGGATTTAATTTTACATCTTGATAAAAATTTAGACCTTCTGCTTCAGCGGTTTGGCACCGAAACCTA
TTTTATTTTATTTCTTATCGTTTTTCTGGAAACCGGGCTTGTGGTAACTCCTTTTCTTCCCGGCGATTCGCTCCTTTTTG
CAGCAGGAGCTTTATCTGCACTGGGAAGTTTAAATATTTACCTGGTAATGTTAATTTTCATTTTTGCCGCAGTGCTTGGT
AATACTTCAAACTATTTTATCGCCAGGTTCTTTAGTAATGCCGTTCTGAATAAAAAAAATCTTAAGTTTATAAAACAAGA
GCACTTACTAAAAACCCAGAGGTTTTACGAAAAATATGGACCAGTGACCATTGTTCTGGCCCGTTTTGTCCCTATAGTTC
GTACCTTTGCTCCTTTTGTCGCAGGTATTGGCCGGATGAATTTTTTTAAGTTCAGTCTCTACAACCTAATTGGAGCTTTT
CTCTGGGTGTTCCTCTTAACCTTAGCAGGATATTACTTCGGTAATATTCCCGTAATTAAAGATAATTTTTCACTTGTAGT
GATAGCTATAATTTTAATCTCAATCCTTCCCGGATTAATATCATTTATAAAAAAAGGAAAGTAG

Upstream 100 bases:

>100_bases
ATTATCCCCCCTTTTTTTTGGTATTTTAACATCTTTTTTATTTAAGTAAAATAAATTAAAATAAAAACATAAAACTCATC
TCAAATCAAAGGAGATAATT

Downstream 100 bases:

>100_bases
CGTCCGGAAGGGCAAAGGTCTATCGCCAGGGCTATTTCCTCCGCCTTGAATGGGCATTTGGTAAGAAATCTTTTCTAAAA
CCTTTAATTGCTTTTCATTT

Product: dedA protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MGAIWDLILHLDKNLDLLLQRFGTETYFILFLIVFLETGLVVTPFLPGDSLLFAAGALSALGSLNIYLVMLIFIFAAVLG
NTSNYFIARFFSNAVLNKKNLKFIKQEHLLKTQRFYEKYGPVTIVLARFVPIVRTFAPFVAGIGRMNFFKFSLYNLIGAF
LWVFLLTLAGYYFGNIPVIKDNFSLVVIAIILISILPGLISFIKKGK

Sequences:

>Translated_207_residues
MGAIWDLILHLDKNLDLLLQRFGTETYFILFLIVFLETGLVVTPFLPGDSLLFAAGALSALGSLNIYLVMLIFIFAAVLG
NTSNYFIARFFSNAVLNKKNLKFIKQEHLLKTQRFYEKYGPVTIVLARFVPIVRTFAPFVAGIGRMNFFKFSLYNLIGAF
LWVFLLTLAGYYFGNIPVIKDNFSLVVIAIILISILPGLISFIKKGK
>Mature_206_residues
GAIWDLILHLDKNLDLLLQRFGTETYFILFLIVFLETGLVVTPFLPGDSLLFAAGALSALGSLNIYLVMLIFIFAAVLGN
TSNYFIARFFSNAVLNKKNLKFIKQEHLLKTQRFYEKYGPVTIVLARFVPIVRTFAPFVAGIGRMNFFKFSLYNLIGAFL
WVFLLTLAGYYFGNIPVIKDNFSLVVIAIILISILPGLISFIKKGK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=202, Percent_Identity=53.4653465346535, Blast_Score=224, Evalue=4e-60,
Organism=Escherichia coli, GI1789481, Length=152, Percent_Identity=35.5263157894737, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=32.5443786982249, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23335; Mature: 23204

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIWDLILHLDKNLDLLLQRFGTETYFILFLIVFLETGLVVTPFLPGDSLLFAAGALSA
CCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
LGSLNIYLVMLIFIFAAVLGNTSNYFIARFFSNAVLNKKNLKFIKQEHLLKTQRFYEKYG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
PVTIVLARFVPIVRTFAPFVAGIGRMNFFKFSLYNLIGAFLWVFLLTLAGYYFGNIPVIK
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DNFSLVVIAIILISILPGLISFIKKGK
CCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAIWDLILHLDKNLDLLLQRFGTETYFILFLIVFLETGLVVTPFLPGDSLLFAAGALSA
CHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
LGSLNIYLVMLIFIFAAVLGNTSNYFIARFFSNAVLNKKNLKFIKQEHLLKTQRFYEKYG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
PVTIVLARFVPIVRTFAPFVAGIGRMNFFKFSLYNLIGAFLWVFLLTLAGYYFGNIPVIK
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DNFSLVVIAIILISILPGLISFIKKGK
CCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]