| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is modB [H]
Identifier: 78044282
GI number: 78044282
Start: 322240
End: 322932
Strand: Direct
Name: modB [H]
Synonym: CHY_0376
Alternate gene names: 78044282
Gene position: 322240-322932 (Clockwise)
Preceding gene: 78044429
Following gene: 78045037
Centisome position: 13.42
GC content: 41.85
Gene sequence:
>693_bases ATGGAATTTATCTGGGAAGGGATTAAAGAAAGTATTCGTTTAATTTTAACCGGAGACCCGGAACTTTACCAAATTTTACA TCTTACTTTAAATGTAAGCCTAACGGCAACTTTGCTTGCGGCAATTGTGGGCTTACCGATAGGTGCTTTTTTAGGTGGCA AAAAATTTTGGGGTCAGAAAATAATTCTTGGAATCTTTAATGCTCTTTTAGGCCTGCCGCCGGTGGTGGTGGGCCTTTGG CTTACTATGTTTTTGTGGCGAAGCGGACCTCTGGGTAACTTAAACCTTTTGTATACCCCCAAAGCCATGATTTTAGCTCA ATTTTGCATTGCTTTACCGGAAGTAATAGTATTTACCGCTGTGGCTTTTAGCCAAATTTCCGAGAACTTTTTTCGTCAGG TTAAAGCTCTGGGGGCAAATCGTTACCAGCAACTTTACCTGTTATTAAAGGAAGTACGGCTTGGGTTACTGGCAGCGGTG ATTGCCGGTTTTGGTGCTGCTATTTCCGAAGTTGGGGCTTCGATTATGGTGGGAGGCAATATCTATCAGGAGACCCGGGT CTTAACTACCTCAATTTTACTGGAAGTGGGCCGGGGAAATTTTGGTCTGGCAATTGGTTTAAGTATTATTTTAATGTTGA TCTCTTTTATCGTAGTTGGAACACTTACTTACTGGCAAAGAAAGGGTTATTAG
Upstream 100 bases:
>100_bases TTTGTTGAGCCCGGAAGTCCAAAAAGAGATAGGCGAATTTAAGAAAAATTTATACGGGCAATCGTTATTTATTCCTGATG CGCAAAAATAGGAGGAATTT
Downstream 100 bases:
>100_bases CGGTGATTTTAGTAAAAAATTTGCAGGTTTTTCGCGCCCGAAAGCAAATACTTAAAATTAACCAGTTAAAAGTAGTTGCG GGAGAGAAAATTAGCCTTTT
Product: anion ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MEFIWEGIKESIRLILTGDPELYQILHLTLNVSLTATLLAAIVGLPIGAFLGGKKFWGQKIILGIFNALLGLPPVVVGLW LTMFLWRSGPLGNLNLLYTPKAMILAQFCIALPEVIVFTAVAFSQISENFFRQVKALGANRYQQLYLLLKEVRLGLLAAV IAGFGAAISEVGASIMVGGNIYQETRVLTTSILLEVGRGNFGLAIGLSIILMLISFIVVGTLTYWQRKGY
Sequences:
>Translated_230_residues MEFIWEGIKESIRLILTGDPELYQILHLTLNVSLTATLLAAIVGLPIGAFLGGKKFWGQKIILGIFNALLGLPPVVVGLW LTMFLWRSGPLGNLNLLYTPKAMILAQFCIALPEVIVFTAVAFSQISENFFRQVKALGANRYQQLYLLLKEVRLGLLAAV IAGFGAAISEVGASIMVGGNIYQETRVLTTSILLEVGRGNFGLAIGLSIILMLISFIVVGTLTYWQRKGY >Mature_230_residues MEFIWEGIKESIRLILTGDPELYQILHLTLNVSLTATLLAAIVGLPIGAFLGGKKFWGQKIILGIFNALLGLPPVVVGLW LTMFLWRSGPLGNLNLLYTPKAMILAQFCIALPEVIVFTAVAFSQISENFFRQVKALGANRYQQLYLLLKEVRLGLLAAV IAGFGAAISEVGASIMVGGNIYQETRVLTTSILLEVGRGNFGLAIGLSIILMLISFIVVGTLTYWQRKGY
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25117; Mature: 25117
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIWEGIKESIRLILTGDPELYQILHLTLNVSLTATLLAAIVGLPIGAFLGGKKFWGQK CCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHH IILGIFNALLGLPPVVVGLWLTMFLWRSGPLGNLNLLYTPKAMILAQFCIALPEVIVFTA HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH VAFSQISENFFRQVKALGANRYQQLYLLLKEVRLGLLAAVIAGFGAAISEVGASIMVGGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC IYQETRVLTTSILLEVGRGNFGLAIGLSIILMLISFIVVGTLTYWQRKGY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEFIWEGIKESIRLILTGDPELYQILHLTLNVSLTATLLAAIVGLPIGAFLGGKKFWGQK CCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHH IILGIFNALLGLPPVVVGLWLTMFLWRSGPLGNLNLLYTPKAMILAQFCIALPEVIVFTA HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH VAFSQISENFFRQVKALGANRYQQLYLLLKEVRLGLLAAVIAGFGAAISEVGASIMVGGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC IYQETRVLTTSILLEVGRGNFGLAIGLSIILMLISFIVVGTLTYWQRKGY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]