| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is gpr [H]
Identifier: 78044279
GI number: 78044279
Start: 1307539
End: 1308513
Strand: Direct
Name: gpr [H]
Synonym: CHY_1462
Alternate gene names: 78044279
Gene position: 1307539-1308513 (Clockwise)
Preceding gene: 78044275
Following gene: 78044866
Centisome position: 54.45
GC content: 39.28
Gene sequence:
>975_bases ATGGAGCTTCTTAATACTTTAGGAGTAACAATTGACATGGCCGTTGAAGCCCACGAATTATTAAGAGGTGAAGCGGGGAT TGAAATTCCCGGAGTTAAAGTGATTAAAGATAAAAAGGAAAATTATGAAATAACCAAAGTTGAAATTCTAAACGAGCAGG GTGCAGCTCACTTGCAAAAACCCATCGGGAATTATGTTACAATTGATGCCCCGGTGCTTCGAAGTCAAAACAGAACTGCC CAGAAAGAAATTATGTTGGCCTTGGCAAATATTCTAAAAACAATGCTAACAATAAATGATGAGCGACCCATATTAATAGT AGGGCTTGGAAACTGGCACGCCACTCCCGACGCGCTGGGCCCAAAAGTGGTAGACAATATTTTCGTTACGCGCCATTTGT TTAACTTAAAACATGAAGCCCTGAGCAAGGGTTTTAAAAATGTTGCAGCTATTTCCCCCGGAGTCTTAGGTATTACAGGA ATTGAAACGGTAGAAATTGTTCAAGGCATTGTTGAAAAAATCAATCCTTCCTTTGTAATTGCCGTAGATGCTTTAGCTGC CGCCAATGTAGAAAGAATTTGTTCTTCTATTCAAATTGCAGATACAGGAATAAATCCAGGATCAGGGATAGGGAACCAAC GTCCAGGATTAAATCGTGAAGTTTTGGGAATTCCGGTAATCGCCATTGGCTGCCCAACGGTGGTTAACGCAGCTATTATC GCCAAAAATACCCTGGAAATGTTTTTAGATAAATTCAGTTCATCAAAACAATTTTACCAATTTTTAAAAGCCAGGCAAGC GGGAATAATTACCTTAGTCCGGGAAGTTTTAGAGCCATTTACTAATAATCTTACGGTAACACCAAAAGAAATTGATTTTT TATTGTTAAATCTTGCTAAAGTAATAGCCGGGGGCATTACCATGGCAGTACACGAAAACGTCCAGCCGGAAAATGTGGAA ATCTACTTAAATTAA
Upstream 100 bases:
>100_bases TTTTTGCGATAATTTCCACTTTTTGCAAGAACCCTTTCCTCCCTTATAAAATTTCTTCCTTTGTCACACACTACTCGCTG AGGTGATAATTTTGGCAATA
Downstream 100 bases:
>100_bases AGGGGACAGGAGGTTAACCCCCTCTGCCCCACAAAAAGTTAGTTAGACTTTTCCAGAAAGCTGTTGCTCCGCTTGCTGAA TTAATTTTTTGACCATATTG
Product: germination protease
Products: NA
Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MELLNTLGVTIDMAVEAHELLRGEAGIEIPGVKVIKDKKENYEITKVEILNEQGAAHLQKPIGNYVTIDAPVLRSQNRTA QKEIMLALANILKTMLTINDERPILIVGLGNWHATPDALGPKVVDNIFVTRHLFNLKHEALSKGFKNVAAISPGVLGITG IETVEIVQGIVEKINPSFVIAVDALAAANVERICSSIQIADTGINPGSGIGNQRPGLNREVLGIPVIAIGCPTVVNAAII AKNTLEMFLDKFSSSKQFYQFLKARQAGIITLVREVLEPFTNNLTVTPKEIDFLLLNLAKVIAGGITMAVHENVQPENVE IYLN
Sequences:
>Translated_324_residues MELLNTLGVTIDMAVEAHELLRGEAGIEIPGVKVIKDKKENYEITKVEILNEQGAAHLQKPIGNYVTIDAPVLRSQNRTA QKEIMLALANILKTMLTINDERPILIVGLGNWHATPDALGPKVVDNIFVTRHLFNLKHEALSKGFKNVAAISPGVLGITG IETVEIVQGIVEKINPSFVIAVDALAAANVERICSSIQIADTGINPGSGIGNQRPGLNREVLGIPVIAIGCPTVVNAAII AKNTLEMFLDKFSSSKQFYQFLKARQAGIITLVREVLEPFTNNLTVTPKEIDFLLLNLAKVIAGGITMAVHENVQPENVE IYLN >Mature_324_residues MELLNTLGVTIDMAVEAHELLRGEAGIEIPGVKVIKDKKENYEITKVEILNEQGAAHLQKPIGNYVTIDAPVLRSQNRTA QKEIMLALANILKTMLTINDERPILIVGLGNWHATPDALGPKVVDNIFVTRHLFNLKHEALSKGFKNVAAISPGVLGITG IETVEIVQGIVEKINPSFVIAVDALAAANVERICSSIQIADTGINPGSGIGNQRPGLNREVLGIPVIAIGCPTVVNAAII AKNTLEMFLDKFSSSKQFYQFLKARQAGIITLVREVLEPFTNNLTVTPKEIDFLLLNLAKVIAGGITMAVHENVQPENVE IYLN
Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005080 - InterPro: IPR000671 - ProDom: PD041835 [H]
Pfam domain/function: PF03418 Peptidase_A25 [H]
EC number: =3.4.24.78 [H]
Molecular weight: Translated: 35114; Mature: 35114
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLNTLGVTIDMAVEAHELLRGEAGIEIPGVKVIKDKKENYEITKVEILNEQGAAHLQK CCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHH PIGNYVTIDAPVLRSQNRTAQKEIMLALANILKTMLTINDERPILIVGLGNWHATPDALG CCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCC PKVVDNIFVTRHLFNLKHEALSKGFKNVAAISPGVLGITGIETVEIVQGIVEKINPSFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEE AVDALAAANVERICSSIQIADTGINPGSGIGNQRPGLNREVLGIPVIAIGCPTVVNAAII EEHHHHHCCHHHHHHHCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHH AKNTLEMFLDKFSSSKQFYQFLKARQAGIITLVREVLEPFTNNLTVTPKEIDFLLLNLAK HHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHH VIAGGITMAVHENVQPENVEIYLN HHHCCEEEEEECCCCCCCEEEEEC >Mature Secondary Structure MELLNTLGVTIDMAVEAHELLRGEAGIEIPGVKVIKDKKENYEITKVEILNEQGAAHLQK CCCHHHHCCEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHH PIGNYVTIDAPVLRSQNRTAQKEIMLALANILKTMLTINDERPILIVGLGNWHATPDALG CCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCC PKVVDNIFVTRHLFNLKHEALSKGFKNVAAISPGVLGITGIETVEIVQGIVEKINPSFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEE AVDALAAANVERICSSIQIADTGINPGSGIGNQRPGLNREVLGIPVIAIGCPTVVNAAII EEHHHHHCCHHHHHHHCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHH AKNTLEMFLDKFSSSKQFYQFLKARQAGIITLVREVLEPFTNNLTVTPKEIDFLLLNLAK HHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHH VIAGGITMAVHENVQPENVEIYLN HHHCCEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]