Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044263

Identifier: 78044263

GI number: 78044263

Start: 529049

End: 529714

Strand: Direct

Name: 78044263

Synonym: CHY_0611

Alternate gene names: NA

Gene position: 529049-529714 (Clockwise)

Preceding gene: 78043680

Following gene: 78043000

Centisome position: 22.03

GC content: 33.48

Gene sequence:

>666_bases
GTGAGGAGAAAAGGAATTTTTATCCTATTAATTGTTTTAATATTCCTCTTTTTATTTTTTAACTTAACTCCAGCGGCAGA
AATTTTAAATGATAAATTTAAACAGTTTGGCGAATTTCTAAAAAAAGTTAATCATGATAAAAAGTATGATGTAGTTGTTG
CCAGAATTGGTGACCGGGATGTGACGCTAAGAGAGTTTGAACTGTTTAAAAGAAGTTATGTTTTAGACGGCAGAACTGTT
ACTCCGGAAGAGGTGCTGGAGGAATTAAAGAGACGAACGGTGTTGAAGGAAGAAGCCGAAAAAAGAAAAATAACTGTTTC
CGATGAAGAAGTAGAAAAGGCAATCCAGGATTATAAAGAAGGGATGGAAAACTTAAAAAAGACCAATCCGGCAGAGTATA
GCGAGTTTCTAAGTTACCTTGAAGGGTTAAATATGACCGAAGAACAATACTGGAAAAGTAAAGAAATTTTTGAAATTTAC
CGTAAGGCTCTTGTAACAGGGAAGGTTCGGAAAGCGATTTTAAAAGAGTTAAGCGAAAAATATAACCTTACTGGAAATGA
GCTTCAGAAAAAGTATCGGGATTATATCGAAGAAGAAAAGGCAAAACTTAAAGTTAAAATTTTAAAACCAGAACTTATCG
GAATAAAAAACAGTACAGATTCCTAA

Upstream 100 bases:

>100_bases
GGACGGTAATTAACTTTTGTATATTAATTGGAATGCTTTATATTGCGGTAAGGTTTATTAAAAAATACTGGTAGTCTTAT
TTTTAAAGGTGGTAAAAAAG

Downstream 100 bases:

>100_bases
GAGCCGCAGCCTACCTTGGGATATATTAACAGTAAGTTTTAACCAAAGGGGTGTGGCTTTTTATGTTAAGTAAATTTGGG
GACGGTGATTTTACAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV
TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY
RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS

Sequences:

>Translated_221_residues
MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV
TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY
RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS
>Mature_221_residues
MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV
TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY
RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26178; Mature: 26178

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC
VTLREFELFKRSYVLDGRTVTPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKE
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIYRKALVTGKVRKAILKELSEK
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS
HCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCC
>Mature Secondary Structure
MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC
VTLREFELFKRSYVLDGRTVTPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKE
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIYRKALVTGKVRKAILKELSEK
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS
HCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA