| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044263
Identifier: 78044263
GI number: 78044263
Start: 529049
End: 529714
Strand: Direct
Name: 78044263
Synonym: CHY_0611
Alternate gene names: NA
Gene position: 529049-529714 (Clockwise)
Preceding gene: 78043680
Following gene: 78043000
Centisome position: 22.03
GC content: 33.48
Gene sequence:
>666_bases GTGAGGAGAAAAGGAATTTTTATCCTATTAATTGTTTTAATATTCCTCTTTTTATTTTTTAACTTAACTCCAGCGGCAGA AATTTTAAATGATAAATTTAAACAGTTTGGCGAATTTCTAAAAAAAGTTAATCATGATAAAAAGTATGATGTAGTTGTTG CCAGAATTGGTGACCGGGATGTGACGCTAAGAGAGTTTGAACTGTTTAAAAGAAGTTATGTTTTAGACGGCAGAACTGTT ACTCCGGAAGAGGTGCTGGAGGAATTAAAGAGACGAACGGTGTTGAAGGAAGAAGCCGAAAAAAGAAAAATAACTGTTTC CGATGAAGAAGTAGAAAAGGCAATCCAGGATTATAAAGAAGGGATGGAAAACTTAAAAAAGACCAATCCGGCAGAGTATA GCGAGTTTCTAAGTTACCTTGAAGGGTTAAATATGACCGAAGAACAATACTGGAAAAGTAAAGAAATTTTTGAAATTTAC CGTAAGGCTCTTGTAACAGGGAAGGTTCGGAAAGCGATTTTAAAAGAGTTAAGCGAAAAATATAACCTTACTGGAAATGA GCTTCAGAAAAAGTATCGGGATTATATCGAAGAAGAAAAGGCAAAACTTAAAGTTAAAATTTTAAAACCAGAACTTATCG GAATAAAAAACAGTACAGATTCCTAA
Upstream 100 bases:
>100_bases GGACGGTAATTAACTTTTGTATATTAATTGGAATGCTTTATATTGCGGTAAGGTTTATTAAAAAATACTGGTAGTCTTAT TTTTAAAGGTGGTAAAAAAG
Downstream 100 bases:
>100_bases GAGCCGCAGCCTACCTTGGGATATATTAACAGTAAGTTTTAACCAAAGGGGTGTGGCTTTTTATGTTAAGTAAATTTGGG GACGGTGATTTTACAGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS
Sequences:
>Translated_221_residues MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS >Mature_221_residues MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRDVTLREFELFKRSYVLDGRTV TPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKEGMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIY RKALVTGKVRKAILKELSEKYNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26178; Mature: 26178
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRD CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC VTLREFELFKRSYVLDGRTVTPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKE CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIYRKALVTGKVRKAILKELSEK HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS HCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCC >Mature Secondary Structure MRRKGIFILLIVLIFLFLFFNLTPAAEILNDKFKQFGEFLKKVNHDKKYDVVVARIGDRD CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCC VTLREFELFKRSYVLDGRTVTPEEVLEELKRRTVLKEEAEKRKITVSDEEVEKAIQDYKE CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GMENLKKTNPAEYSEFLSYLEGLNMTEEQYWKSKEIFEIYRKALVTGKVRKAILKELSEK HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLTGNELQKKYRDYIEEEKAKLKVKILKPELIGIKNSTDS HCCCHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA