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The map label for this gene is yknX [H]

Identifier: 78044152

GI number: 78044152

Start: 74861

End: 76042

Strand: Direct

Name: yknX [H]

Synonym: CHY_0088

Alternate gene names: 78044152

Gene position: 74861-76042 (Clockwise)

Preceding gene: 78042741

Following gene: 78043038

Centisome position: 3.12

GC content: 43.32

Gene sequence:

>1182_bases
ATGAAAAAGGGTGTAAAGATTGCGTTAGTGCTGGTGGTTTTAGCGGTGGCTGTTGTAGGATATTTTTCTTATCGAGCAGC
GATCGGTAGAAAAAACCTTCAGCTTGATGTTAAAACCGCCAAAGTTACAGTGGGGGATGTGGAAGCGTATCTTTCGGTTT
CAGCAACAATCGAATCCCAAAAGAAAAAAGATTACTATGCTCCTCAAGCTAAGGTAAAAAGGGTTTATGTTAAAGTTGGA
GATAGGGTTAAAAAAGGTGATGTTTTAGTTACCTTTGAAACCCAGGATTACAGTTCTCAAATCGAACAGGCCCAAATTCA
GTATGAAAATGCAGTGCTACAGCGGGATGAGCTTTATGCTCAGAAAAAGGATATTGAAGATAAAATAAAAGAACTTGATG
CTCAGATAAGTAGTTTAGAAAAAAGCAATAATCAAGATGCGGCAAAACTTGAAAGCTTAAAACAACAGCGGGATAATATC
CAGCCGGTATCCATCGCTCGGATTAAGCAAGCGGAAAACTCGGTAAAGCTTGCAAAACTTACCTTAGATAATGCCAAAAA
AGCAGCAGCTCAGGCCCAGGACAAGATAACCGCCGACTTCTCCGGGGTGGTTACCGCGGTGAACGTGGTGGAAGGAGCTA
TGGCTAACTCAATGCAGCCGGCGGTGACCGTTATGGATCTTTCTAATTTAAAGGCGGTAGCAAAGCTTGGCCGGTTTGAT
GCAGCTAAAGTTTCTTTAGGCCAAAAAGTAATTTTACGTAATGGCAAAAAGAGTTACAAAGGCGAGGTTAGCTTTATTGA
GCCGGTAGCCAGCACCACAATGACTGCCTCAGGGCAGGAAAGCACTGTTGGGGTAGAAATTAAAATTTTAGATAAAAACC
CTGATTTAAAGGTTGGTTTTGATGTGGATGCTGATATCTTAATAGGAAGCAAAACCGGGGTGGTAAAGGTGCCGGTGGAA
GCAATACGCCAGGAAAAAGATAAAACATCGGTATTTGTAGTCGAACAGGGGAAAGCAAAGCAAAAGGAAGTACAAACGGG
TCTCTGGTCGGATGATGAAGTTGAAATTACTTCCGGGTTAACAGCGGGGGAAACGGTGATTTTAAACCCGGGATTAAAAG
TTACTGATGGTGCTCCGGTCAGGCTTCCTTTTGCCGGCGGACTAGGGAGGCGGATGCAGTGA

Upstream 100 bases:

>100_bases
AGTTCTTTGGTTAATTTAGAAAATTTTAAGAAATGATTAAGACGTAATTTAGAAAAAGAAGTTAGAATAAAACTAAAATA
TTTGAAATGGAGGGTGAATT

Downstream 100 bases:

>100_bases
TTGAACTAATAGATGTGGTTAAAGAGTACGAGGTAGGGAAAGAGCGCTTTCGGGCTTTAAAAAATATTAGTTTAAAGATA
AAAGCCGGAGAGTTTACTTC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKKGVKIALVLVVLAVAVVGYFSYRAAIGRKNLQLDVKTAKVTVGDVEAYLSVSATIESQKKKDYYAPQAKVKRVYVKVG
DRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYAQKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQRDNI
QPVSIARIKQAENSVKLAKLTLDNAKKAAAQAQDKITADFSGVVTAVNVVEGAMANSMQPAVTVMDLSNLKAVAKLGRFD
AAKVSLGQKVILRNGKKSYKGEVSFIEPVASTTMTASGQESTVGVEIKILDKNPDLKVGFDVDADILIGSKTGVVKVPVE
AIRQEKDKTSVFVVEQGKAKQKEVQTGLWSDDEVEITSGLTAGETVILNPGLKVTDGAPVRLPFAGGLGRRMQ

Sequences:

>Translated_393_residues
MKKGVKIALVLVVLAVAVVGYFSYRAAIGRKNLQLDVKTAKVTVGDVEAYLSVSATIESQKKKDYYAPQAKVKRVYVKVG
DRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYAQKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQRDNI
QPVSIARIKQAENSVKLAKLTLDNAKKAAAQAQDKITADFSGVVTAVNVVEGAMANSMQPAVTVMDLSNLKAVAKLGRFD
AAKVSLGQKVILRNGKKSYKGEVSFIEPVASTTMTASGQESTVGVEIKILDKNPDLKVGFDVDADILIGSKTGVVKVPVE
AIRQEKDKTSVFVVEQGKAKQKEVQTGLWSDDEVEITSGLTAGETVILNPGLKVTDGAPVRLPFAGGLGRRMQ
>Mature_393_residues
MKKGVKIALVLVVLAVAVVGYFSYRAAIGRKNLQLDVKTAKVTVGDVEAYLSVSATIESQKKKDYYAPQAKVKRVYVKVG
DRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYAQKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQRDNI
QPVSIARIKQAENSVKLAKLTLDNAKKAAAQAQDKITADFSGVVTAVNVVEGAMANSMQPAVTVMDLSNLKAVAKLGRFD
AAKVSLGQKVILRNGKKSYKGEVSFIEPVASTTMTASGQESTVGVEIKILDKNPDLKVGFDVDADILIGSKTGVVKVPVE
AIRQEKDKTSVFVVEQGKAKQKEVQTGLWSDDEVEITSGLTAGETVILNPGLKVTDGAPVRLPFAGGLGRRMQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=351, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42574; Mature: 42574

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGVKIALVLVVLAVAVVGYFSYRAAIGRKNLQLDVKTAKVTVGDVEAYLSVSATIESQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEEEEEEEHHHH
KKKDYYAPQAKVKRVYVKVGDRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYA
HCCCCCCCHHHHEEEEEEECCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQRDNIQPVSIARIKQAENSVKLAKL
HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEE
TLDNAKKAAAQAQDKITADFSGVVTAVNVVEGAMANSMQPAVTVMDLSNLKAVAKLGRFD
ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCC
AAKVSLGQKVILRNGKKSYKGEVSFIEPVASTTMTASGQESTVGVEIKILDKNPDLKVGF
HHHHHCCCEEEEECCCCCCCCCEEEECHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEC
DVDADILIGSKTGVVKVPVEAIRQEKDKTSVFVVEQGKAKQKEVQTGLWSDDEVEITSGL
CCCCEEEEECCCCEEECCHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCC
TAGETVILNPGLKVTDGAPVRLPFAGGLGRRMQ
CCCCEEEECCCEEECCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKKGVKIALVLVVLAVAVVGYFSYRAAIGRKNLQLDVKTAKVTVGDVEAYLSVSATIESQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEEEEEEEEHHHH
KKKDYYAPQAKVKRVYVKVGDRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYA
HCCCCCCCHHHHEEEEEEECCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQRDNIQPVSIARIKQAENSVKLAKL
HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEE
TLDNAKKAAAQAQDKITADFSGVVTAVNVVEGAMANSMQPAVTVMDLSNLKAVAKLGRFD
ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCC
AAKVSLGQKVILRNGKKSYKGEVSFIEPVASTTMTASGQESTVGVEIKILDKNPDLKVGF
HHHHHCCCEEEEECCCCCCCCCEEEECHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEC
DVDADILIGSKTGVVKVPVEAIRQEKDKTSVFVVEQGKAKQKEVQTGLWSDDEVEITSGL
CCCCEEEEECCCCEEECCHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCC
TAGETVILNPGLKVTDGAPVRLPFAGGLGRRMQ
CCCCEEEECCCEEECCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]