Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78043969

Identifier: 78043969

GI number: 78043969

Start: 2176854

End: 2177354

Strand: Direct

Name: 78043969

Synonym: CHY_2432

Alternate gene names: NA

Gene position: 2176854-2177354 (Clockwise)

Preceding gene: 78044204

Following gene: 78044129

Centisome position: 90.64

GC content: 36.13

Gene sequence:

>501_bases
ATGTCTTTTGTTTCCTATATCCGCCAACCCCGGGCGGCTATGCAAAAGCTGTTACTTTATCCCGGAAGCAAAAAAGCATT
TTATAATTATTTTATAGCATCCTTTCTCTTACTAATTGGCCTTATGTTTTTCCCCTTTTCCCAGAGTTCAGACTACTTCT
ACCAAATTCTTTCTTTTAAACAGCCAGCAATAATTTTAACTTTTTTAGGTATCTTTATCTTATTTTTTTCTCTTATAGGT
ATAGTTAATCTTATCGTAGCTTACCTTACCGCCCTTATTGTCAGCAAAAATATTACAAAAATCGATCAGGACTTACTGTT
TCAGCGGTTTTTACTGGGTTATTCGGAACTTATCTTGTTTTCTGCCTTACCCCAGGGATTGGCCTGGCTCAATCTGCTTA
AATTAGATCTTATTTTTGCCGTATTAACCTGGGCCGCCCAACTATACGCCCTTTATCTTGCTTATCTCATGATAACTACC
GCCATTAATTTGTTTAAATAA

Upstream 100 bases:

>100_bases
TGTGCCCGCCGCCGCTATCAATCCACCGTTTTTCCTCGCCTTCATAATTTTTTGATAATTTGTTATAATATTATTAACAC
TCCTCAAGAGGTGGTTAATC

Downstream 100 bases:

>100_bases
AGCCGGGGTCTACCCCCGGCTTAACACTTTCTTTTTCACATTTTCGTAATCCTTACGGTGAACGTATTTCATTCCCGACT
CATCTAAACTTGCTACCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSFVSYIRQPRAAMQKLLLYPGSKKAFYNYFIASFLLLIGLMFFPFSQSSDYFYQILSFKQPAIILTFLGIFILFFSLIG
IVNLIVAYLTALIVSKNITKIDQDLLFQRFLLGYSELILFSALPQGLAWLNLLKLDLIFAVLTWAAQLYALYLAYLMITT
AINLFK

Sequences:

>Translated_166_residues
MSFVSYIRQPRAAMQKLLLYPGSKKAFYNYFIASFLLLIGLMFFPFSQSSDYFYQILSFKQPAIILTFLGIFILFFSLIG
IVNLIVAYLTALIVSKNITKIDQDLLFQRFLLGYSELILFSALPQGLAWLNLLKLDLIFAVLTWAAQLYALYLAYLMITT
AINLFK
>Mature_165_residues
SFVSYIRQPRAAMQKLLLYPGSKKAFYNYFIASFLLLIGLMFFPFSQSSDYFYQILSFKQPAIILTFLGIFILFFSLIGI
VNLIVAYLTALIVSKNITKIDQDLLFQRFLLGYSELILFSALPQGLAWLNLLKLDLIFAVLTWAAQLYALYLAYLMITTA
INLFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19092; Mature: 18961

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVSYIRQPRAAMQKLLLYPGSKKAFYNYFIASFLLLIGLMFFPFSQSSDYFYQILSFK
CCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
QPAIILTFLGIFILFFSLIGIVNLIVAYLTALIVSKNITKIDQDLLFQRFLLGYSELILF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALPQGLAWLNLLKLDLIFAVLTWAAQLYALYLAYLMITTAINLFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFVSYIRQPRAAMQKLLLYPGSKKAFYNYFIASFLLLIGLMFFPFSQSSDYFYQILSFK
CHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
QPAIILTFLGIFILFFSLIGIVNLIVAYLTALIVSKNITKIDQDLLFQRFLLGYSELILF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALPQGLAWLNLLKLDLIFAVLTWAAQLYALYLAYLMITTAINLFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA