| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043931
Identifier: 78043931
GI number: 78043931
Start: 1261708
End: 1262808
Strand: Direct
Name: 78043931
Synonym: CHY_1410
Alternate gene names: NA
Gene position: 1261708-1262808 (Clockwise)
Preceding gene: 78043355
Following gene: 78044518
Centisome position: 52.54
GC content: 39.24
Gene sequence:
>1101_bases ATGAAAACTCTAAGAATTACTTTCCCTTACATGGGAAACTATGTCCACGCTTTTCGCGGGTTGTTAGAAGATTTGGGTTA TGAAGTGGTAATGCCAGTAAAACCTTCCAAGCGAACCTTAGATTTAGGAGTTAAATATGCACCGGAGTTTTCCTGCCTTC CCTACAAAATTGTACTTGGTACCTACTTGGAAACACTACCAAAAGGCGTTGACCGCATTGTTACCAGCGGTGGTGTCGGG CCCTGTCGAGCCGGTTTGTATGCCAGCCTGCACGAAAAGATTTTAAAAAAAATGGGTTATAACGTTGAATTTATTGTGTT GGAGCCACCACTTGTTGATTTAAAAGGTTTTTACAAGACGGTACAGAAGTTAAATTACAAAAACTACTCTTTATGGTACA TATATAAAGCAATTAAACGAAATTGGCGGAAAATAAAGGCACTGGATACCATTGAACAAAAAGCCTTATTTTTAAGACCC CGGGAACTTAAAAAAGGTAGTGTTTCAGCAAAGTACAAAGAAGTCCTGCAGTATGTCATAAATGCCTATTCCGAAAAGGA AATTGATGAAGCGGAACAAGAAGCTTTAAAACAGTTGGATAAAATTCCCGTGGATTTAGAAAAATTAGTGGTTAAAGTCG GAATGGTGGGCGAAATTTACGTTTTACTTGAACCAAGCAGTAACTTTGAAATTGAAGAAACCATCGGCCACTTAGGGGCG GAAGTTAAGCGTTCTATGTTTTTAACCGGGTGGACCCGGGATAATACCTTACCCGGAAAAAGCGAAGAGTTAGTCAGTGT TAAAGCCGCAGCAAAACCTTATCTTCCAGAATTAATCGGTGGCCACGGTCAGGATTCGATTGGAAACGCCATTCTTTATA TAAAACAAGGATTTGATGGCTTAATTCAACTTGCTCCTTTCACCTGTATTCCGGAAATTGTGGCCCGAACCATCTTAACC AAAATTAGTCAAGAACATAATTTCCCGATTTTAACCTTTTTCTTGGACGAGCAAACGGGCAAAGCCGGAATGGAAACCCG TTTAGAAGCATTTATTGACCTTTTAAAAAGAAAAAAACTTCAAAAACTTAGCAAAAGCTAA
Upstream 100 bases:
>100_bases CTTTAACCATAGATGAGCATACTGGAGAAGCAGGACTCGTAACCCGAGTGGAAGCATTCTTAGACATGATAAAGCGTAAA TCCCGGTAAGAGGTGATGGA
Downstream 100 bases:
>100_bases AGGGGGCAAGATAAATGGACCTATATCTTGGAATTGATGTGGGCTCGGTAAGTACAAATCTTGTTTTAATTGATGAAGAA AATAACGTTCATGAAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS
Sequences:
>Translated_366_residues MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS >Mature_366_residues MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS
Specific function: Unknown
COG id: COG3581
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41492; Mature: 41492
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLG CCEEEEECCHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCEECCCCCCCCHHHHHH TYLETLPKGVDRIVTSGGVGPCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH VQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRPRELKKGSVSAKYKEVLQYVI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH NAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA HHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDG HHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEECCCCH LIQLAPFTCIPEIVARTILTKISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH QKLSKS HHHHCC >Mature Secondary Structure MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLG CCEEEEECCHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCEECCCCCCCCHHHHHH TYLETLPKGVDRIVTSGGVGPCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH VQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRPRELKKGSVSAKYKEVLQYVI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH NAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA HHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDG HHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEECCCCH LIQLAPFTCIPEIVARTILTKISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH QKLSKS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA