Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78043931

Identifier: 78043931

GI number: 78043931

Start: 1261708

End: 1262808

Strand: Direct

Name: 78043931

Synonym: CHY_1410

Alternate gene names: NA

Gene position: 1261708-1262808 (Clockwise)

Preceding gene: 78043355

Following gene: 78044518

Centisome position: 52.54

GC content: 39.24

Gene sequence:

>1101_bases
ATGAAAACTCTAAGAATTACTTTCCCTTACATGGGAAACTATGTCCACGCTTTTCGCGGGTTGTTAGAAGATTTGGGTTA
TGAAGTGGTAATGCCAGTAAAACCTTCCAAGCGAACCTTAGATTTAGGAGTTAAATATGCACCGGAGTTTTCCTGCCTTC
CCTACAAAATTGTACTTGGTACCTACTTGGAAACACTACCAAAAGGCGTTGACCGCATTGTTACCAGCGGTGGTGTCGGG
CCCTGTCGAGCCGGTTTGTATGCCAGCCTGCACGAAAAGATTTTAAAAAAAATGGGTTATAACGTTGAATTTATTGTGTT
GGAGCCACCACTTGTTGATTTAAAAGGTTTTTACAAGACGGTACAGAAGTTAAATTACAAAAACTACTCTTTATGGTACA
TATATAAAGCAATTAAACGAAATTGGCGGAAAATAAAGGCACTGGATACCATTGAACAAAAAGCCTTATTTTTAAGACCC
CGGGAACTTAAAAAAGGTAGTGTTTCAGCAAAGTACAAAGAAGTCCTGCAGTATGTCATAAATGCCTATTCCGAAAAGGA
AATTGATGAAGCGGAACAAGAAGCTTTAAAACAGTTGGATAAAATTCCCGTGGATTTAGAAAAATTAGTGGTTAAAGTCG
GAATGGTGGGCGAAATTTACGTTTTACTTGAACCAAGCAGTAACTTTGAAATTGAAGAAACCATCGGCCACTTAGGGGCG
GAAGTTAAGCGTTCTATGTTTTTAACCGGGTGGACCCGGGATAATACCTTACCCGGAAAAAGCGAAGAGTTAGTCAGTGT
TAAAGCCGCAGCAAAACCTTATCTTCCAGAATTAATCGGTGGCCACGGTCAGGATTCGATTGGAAACGCCATTCTTTATA
TAAAACAAGGATTTGATGGCTTAATTCAACTTGCTCCTTTCACCTGTATTCCGGAAATTGTGGCCCGAACCATCTTAACC
AAAATTAGTCAAGAACATAATTTCCCGATTTTAACCTTTTTCTTGGACGAGCAAACGGGCAAAGCCGGAATGGAAACCCG
TTTAGAAGCATTTATTGACCTTTTAAAAAGAAAAAAACTTCAAAAACTTAGCAAAAGCTAA

Upstream 100 bases:

>100_bases
CTTTAACCATAGATGAGCATACTGGAGAAGCAGGACTCGTAACCCGAGTGGAAGCATTCTTAGACATGATAAAGCGTAAA
TCCCGGTAAGAGGTGATGGA

Downstream 100 bases:

>100_bases
AGGGGGCAAGATAAATGGACCTATATCTTGGAATTGATGTGGGCTCGGTAAGTACAAATCTTGTTTTAATTGATGAAGAA
AATAACGTTCATGAAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG
PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP
RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA
EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT
KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS

Sequences:

>Translated_366_residues
MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG
PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP
RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA
EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT
KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS
>Mature_366_residues
MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLGTYLETLPKGVDRIVTSGGVG
PCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKTVQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRP
RELKKGSVSAKYKEVLQYVINAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA
EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDGLIQLAPFTCIPEIVARTILT
KISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKLQKLSKS

Specific function: Unknown

COG id: COG3581

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41492; Mature: 41492

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLG
CCEEEEECCHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCEECCCCCCCCHHHHHH
TYLETLPKGVDRIVTSGGVGPCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
VQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRPRELKKGSVSAKYKEVLQYVI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH
NAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA
HHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH
EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDG
HHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEECCCCH
LIQLAPFTCIPEIVARTILTKISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKL
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
QKLSKS
HHHHCC
>Mature Secondary Structure
MKTLRITFPYMGNYVHAFRGLLEDLGYEVVMPVKPSKRTLDLGVKYAPEFSCLPYKIVLG
CCEEEEECCHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCEECCCCCCCCHHHHHH
TYLETLPKGVDRIVTSGGVGPCRAGLYASLHEKILKKMGYNVEFIVLEPPLVDLKGFYKT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
VQKLNYKNYSLWYIYKAIKRNWRKIKALDTIEQKALFLRPRELKKGSVSAKYKEVLQYVI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH
NAYSEKEIDEAEQEALKQLDKIPVDLEKLVVKVGMVGEIYVLLEPSSNFEIEETIGHLGA
HHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH
EVKRSMFLTGWTRDNTLPGKSEELVSVKAAAKPYLPELIGGHGQDSIGNAILYIKQGFDG
HHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEECCCCH
LIQLAPFTCIPEIVARTILTKISQEHNFPILTFFLDEQTGKAGMETRLEAFIDLLKRKKL
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
QKLSKS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA