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The map label for this gene is ykwD [H]

Identifier: 78043756

GI number: 78043756

Start: 2315840

End: 2316394

Strand: Direct

Name: ykwD [H]

Synonym: CHY_2600

Alternate gene names: 78043756

Gene position: 2315840-2316394 (Clockwise)

Preceding gene: 78044034

Following gene: 78044054

Centisome position: 96.43

GC content: 49.73

Gene sequence:

>555_bases
ATGAAAAAATTTATCACTATTACCTTGCTTGCGCTTTTTCTTTTAGTAACCACCCTTGTTTCCGTTTCCGCTTATACCTT
GAATATTGTAATCGTACCAAAAACCACTCCTGCGGTTACTCCCGTGCCTTCTGCCTCGGTTGCTGCCAATACTCAGGGAA
TAGTGCTGACCGCTGATGAAAAAAGATTCTTAGAGCTGACCAATCAGGCCCGAATAAAAAACGGGTTAAAGCCCTTAGCG
GTCGATCCGCGCCTGGTGCAAACTGCCCGGCTCAAAGCCGAAGATATGGCCAAACTCGGTTACTTCGGCCACATCTCTCC
CACTTACGGTAAACCTTCCACCATGATGATAGCTTATGGCATTAAAGATTACCGGTGGATTGGGGGGGAAAACTTAGCGC
AAAACTCTACGGTAGACCGGGCTTTTAACGCTTTAATGAACAGCCCCACCCACCGGGCCAACATTTTAGACCCCCGCTAC
ACTCATATCGGGGTAGCTTCGGTCCCCGGGGGCCGTTACGGCAAGCTCTGGGTCCAGCACTTTTGCGGCAAGTAG

Upstream 100 bases:

>100_bases
TAATTTATAGTATGATTTTGCGGCTCATGACGTTTTTCCAGAATTTTATGGATTAATTTAATCATTTTTATCTTTTATAA
TTAAGACAAGGAGGGGTAAC

Downstream 100 bases:

>100_bases
TAATTTCGGGACAGTCCCTAAAATTATACTTTAACGGTAATTTTGGGGACTGTCCCTTTTTTTATACTTTAAAACCCGCC
GGAGAGGCGGGCTTTAAAGT

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKFITITLLALFLLVTTLVSVSAYTLNIVIVPKTTPAVTPVPSASVAANTQGIVLTADEKRFLELTNQARIKNGLKPLA
VDPRLVQTARLKAEDMAKLGYFGHISPTYGKPSTMMIAYGIKDYRWIGGENLAQNSTVDRAFNALMNSPTHRANILDPRY
THIGVASVPGGRYGKLWVQHFCGK

Sequences:

>Translated_184_residues
MKKFITITLLALFLLVTTLVSVSAYTLNIVIVPKTTPAVTPVPSASVAANTQGIVLTADEKRFLELTNQARIKNGLKPLA
VDPRLVQTARLKAEDMAKLGYFGHISPTYGKPSTMMIAYGIKDYRWIGGENLAQNSTVDRAFNALMNSPTHRANILDPRY
THIGVASVPGGRYGKLWVQHFCGK
>Mature_184_residues
MKKFITITLLALFLLVTTLVSVSAYTLNIVIVPKTTPAVTPVPSASVAANTQGIVLTADEKRFLELTNQARIKNGLKPLA
VDPRLVQTARLKAEDMAKLGYFGHISPTYGKPSTMMIAYGIKDYRWIGGENLAQNSTVDRAFNALMNSPTHRANILDPRY
THIGVASVPGGRYGKLWVQHFCGK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 20129; Mature: 20129

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFITITLLALFLLVTTLVSVSAYTLNIVIVPKTTPAVTPVPSASVAANTQGIVLTADE
CCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCEECCCCCEEEEECC
KRFLELTNQARIKNGLKPLAVDPRLVQTARLKAEDMAKLGYFGHISPTYGKPSTMMIAYG
HHHHHHHHHHHHHCCCCCCEECCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEC
IKDYRWIGGENLAQNSTVDRAFNALMNSPTHRANILDPRYTHIGVASVPGGRYGKLWVQH
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH
FCGK
HCCC
>Mature Secondary Structure
MKKFITITLLALFLLVTTLVSVSAYTLNIVIVPKTTPAVTPVPSASVAANTQGIVLTADE
CCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCEECCCCCEEEEECC
KRFLELTNQARIKNGLKPLAVDPRLVQTARLKAEDMAKLGYFGHISPTYGKPSTMMIAYG
HHHHHHHHHHHHHCCCCCCEECCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEC
IKDYRWIGGENLAQNSTVDRAFNALMNSPTHRANILDPRYTHIGVASVPGGRYGKLWVQH
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH
FCGK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]