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The map label for this gene is ycbK [H]

Identifier: 78043709

GI number: 78043709

Start: 87872

End: 88735

Strand: Direct

Name: ycbK [H]

Synonym: CHY_0101

Alternate gene names: 78043709

Gene position: 87872-88735 (Clockwise)

Preceding gene: 78044501

Following gene: 78044910

Centisome position: 3.66

GC content: 43.17

Gene sequence:

>864_bases
ATGAGTCAGTACTACCGGGGGGTTTTACTTACTTTTTTATCGGCGGCGGGTTTTGGTTTACTTCCGATTTTTGCGGTGTT
TGCGTATAAGGAGGGAGCTTCGCCCTATACGCTGCTTTTTTGGCGGTTTTTCTTGGCGGGGCTTATTTTTCAGGTTTATA
ACTATTATGTTCATAAGGGTTTTGGCATTACCAAAAAAGAGATTTTATATGTTTTGGCGATGGGGATTTTATATACAATA
CAGTCTTCCTGCTTTTTTCTTTCGGTTAAATACATTTCAGCATCGCTGACATCGTTAATCTTTTATACTTACCCGGCGCT
GGTGGCGATTTTATCAAGCATAGTCTATAAAGACCGGCTGGGGTTTAAAGGATTTGTTGCGGTAGCCTTAGCCTTTGCCG
GTCTAATTTTGGTTTTGGGGAATATAAGCGGCAAATTAAATCCAACTGGGGTACTTTTTGCTCTGGCTACGGCGTTAGTT
TATTCGGTTTATATAACGCTGGGGAAAAAGGTTTTAACACAAATTCCCTCTCTAACCGCCAGCAGTTTTATTGCAGTTTT
TGCGGCGATGTGTTTTCTGGTGGTCGGTTTATTAAGCGGCACTCTTGATTTTCTGCCCCCGGAAAAAGTGTGGTTTTCTA
TTTCCGGAATTGTGGTATTTTCTACCCTTCTTGCAATGTTTACCTTTTTTCGGGGAATTGAGCTTTTGGGACCGGCCCGT
GCTTCGATTATTAGCATGTTTGAACCGGTGGTAACGGTTATTTTTGCGGCCCTGTTATTTGCGGAAAAATTGACCCCCGG
GCAAATTGCCGGAGGCGCGCTGGTGCTTCTCGGAGCATACTTGGTAGCCAAAGTAGAAAATTAG

Upstream 100 bases:

>100_bases
AGGGCTACCGAAAAAAGTAGCCTTTTTTCTAAAGAGGTTCGCTGTTTTCAATATCCTTCATATATGTTATTATTGATAAA
AAATCTTGGGGGAGCGGGGA

Downstream 100 bases:

>100_bases
GGACAGTCCCCTTTTTTATACTTAAAGTATAGTTTTAGGGACTGTCCCTAAAATTATTACTTCCCGGAGGGGGGAGGGGT
AAAGACCCGTTGAGCCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSQYYRGVLLTFLSAAGFGLLPIFAVFAYKEGASPYTLLFWRFFLAGLIFQVYNYYVHKGFGITKKEILYVLAMGILYTI
QSSCFFLSVKYISASLTSLIFYTYPALVAILSSIVYKDRLGFKGFVAVALAFAGLILVLGNISGKLNPTGVLFALATALV
YSVYITLGKKVLTQIPSLTASSFIAVFAAMCFLVVGLLSGTLDFLPPEKVWFSISGIVVFSTLLAMFTFFRGIELLGPAR
ASIISMFEPVVTVIFAALLFAEKLTPGQIAGGALVLLGAYLVAKVEN

Sequences:

>Translated_287_residues
MSQYYRGVLLTFLSAAGFGLLPIFAVFAYKEGASPYTLLFWRFFLAGLIFQVYNYYVHKGFGITKKEILYVLAMGILYTI
QSSCFFLSVKYISASLTSLIFYTYPALVAILSSIVYKDRLGFKGFVAVALAFAGLILVLGNISGKLNPTGVLFALATALV
YSVYITLGKKVLTQIPSLTASSFIAVFAAMCFLVVGLLSGTLDFLPPEKVWFSISGIVVFSTLLAMFTFFRGIELLGPAR
ASIISMFEPVVTVIFAALLFAEKLTPGQIAGGALVLLGAYLVAKVEN
>Mature_286_residues
SQYYRGVLLTFLSAAGFGLLPIFAVFAYKEGASPYTLLFWRFFLAGLIFQVYNYYVHKGFGITKKEILYVLAMGILYTIQ
SSCFFLSVKYISASLTSLIFYTYPALVAILSSIVYKDRLGFKGFVAVALAFAGLILVLGNISGKLNPTGVLFALATALVY
SVYITLGKKVLTQIPSLTASSFIAVFAAMCFLVVGLLSGTLDFLPPEKVWFSISGIVVFSTLLAMFTFFRGIELLGPARA
SIISMFEPVVTVIFAALLFAEKLTPGQIAGGALVLLGAYLVAKVEN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31136; Mature: 31005

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQYYRGVLLTFLSAAGFGLLPIFAVFAYKEGASPYTLLFWRFFLAGLIFQVYNYYVHKG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FGITKKEILYVLAMGILYTIQSSCFFLSVKYISASLTSLIFYTYPALVAILSSIVYKDRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFKGFVAVALAFAGLILVLGNISGKLNPTGVLFALATALVYSVYITLGKKVLTQIPSLTA
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SSFIAVFAAMCFLVVGLLSGTLDFLPPEKVWFSISGIVVFSTLLAMFTFFRGIELLGPAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
ASIISMFEPVVTVIFAALLFAEKLTPGQIAGGALVLLGAYLVAKVEN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]